Variant report

Variant	rs73867423
Chromosome Location	chr3:146311400-146311401
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs59709632	0.98[AFR][1000 genomes]
rs60870021	0.98[AFR][1000 genomes]
rs6767834	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73867413	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73867414	1.00[AMR][1000 genomes]
rs73867415	1.00[AMR][1000 genomes]
rs73867430	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432489	chr3:146271370-146323969	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv877623	chr3:146278616-146319368	Enhancers Weak transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:146298600-146313200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr3:146302600-146316400	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr3:146311200-146311400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr3:146311400-146316000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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