Variant report

Variant	rs73902810
Chromosome Location	chr20:22483156-22483157
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73900490	1.00[AMR][1000 genomes]
rs73900497	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73902808	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1066578	chr20:22472671-22513844	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22473600-22483400	Weak transcription	Pancreas	Pancrea
2	chr20:22480000-22484600	Enhancers	Rectal Mucosa Donor 31	rectum
3	chr20:22480200-22483400	Enhancers	HepG2	liver
4	chr20:22481000-22483200	Weak transcription	Stomach Mucosa	stomach
5	chr20:22481000-22485200	Enhancers	Fetal Intestine Small	intestine
6	chr20:22482000-22485600	Enhancers	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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