Variant report

Variant	rs73907171
Chromosome Location	chr21:45752080-45752081
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:59)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:59 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr21:45751690-45752094	MCF-7	breast:	n/a	n/a
2	POLR2A	chr21:45751464-45752085	HepG2	liver:	n/a	n/a
3	POLR2A	chr21:45751456-45752138	GM12892	blood:	n/a	n/a
4	MTA3	chr21:45751088-45752199	GM12878	blood:	n/a	n/a
5	POLR2A	chr21:45751709-45752131	A549	lung:	n/a	n/a
6	POLR2A	chr21:45748731-45754091	MCF10A-Er-Src	breast:	n/a	n/a
7	POLR2A	chr21:45752077-45752337	ProgFib	skin:	n/a	n/a
8	POLR2A	chr21:45751687-45752172	Hela-S3	cervix:	n/a	n/a
9	POLR2A	chr21:45747088-45752198	GM12892	blood:	n/a	n/a
10	MYC	chr21:45751819-45752083	K562	blood:	n/a	n/a
11	POLR2A	chr21:45746630-45754202	Hela-S3	cervix:	n/a	n/a
12	POU2F2	chr21:45751573-45752193	GM12878	blood:	n/a	n/a
13	CTCF	chr21:45751960-45752110	WERI-Rb-1	eye:	n/a	n/a
14	MAX	chr21:45751811-45752088	K562	blood:	n/a	n/a
15	POLR2A	chr21:45749308-45754156	IMR90	lung:	n/a	n/a
16	POLR2A	chr21:45747142-45753416	MCF-7	breast:	n/a	n/a
17	POLR2A	chr21:45746701-45754372	Hela-S3	cervix:	n/a	n/a
18	POLR2A	chr21:45746537-45752092	K562	blood:	n/a	n/a
19	POLR2A	chr21:45751283-45752185	HepG2	liver:	n/a	n/a
20	POLR2A	chr21:45747288-45755768	HepG2	liver:	n/a	n/a
21	POLR2A	chr21:45746764-45754899	GM12892	blood:	n/a	n/a
22	MAX	chr21:45751729-45752148	K562	blood:	n/a	n/a
23	POLR2A	chr21:45747474-45752650	U87	brain:	n/a	n/a
24	POLR2A	chr21:45747421-45752230	GM12878	blood:	n/a	n/a
25	POLR2A	chr21:45751682-45752145	H1-hESC	embryonic stem cell:	n/a	n/a
26	POLR2A	chr21:45750964-45752290	U87	brain:	n/a	n/a
27	POLR2A	chr21:45751767-45752188	GM12891	blood:	n/a	n/a
28	POLR2A	chr21:45746673-45752639	GM12878	blood:	n/a	n/a
29	POLR2A	chr21:45746510-45752196	K562	blood:	n/a	n/a
30	POLR2A	chr21:45746717-45752195	GM12891	blood:	n/a	n/a
31	POLR2A	chr21:45751016-45752118	PANC-1	pancreas:	n/a	n/a
32	POLR2A	chr21:45747397-45752184	GM12891	blood:	n/a	n/a
33	POLR2A	chr21:45750940-45752290	U87	brain:	n/a	n/a
34	POLR2A	chr21:45750314-45753213	MCF10A-Er-Src	breast:	n/a	n/a
35	POLR2A	chr21:45746531-45754407	GM12892	blood:	n/a	n/a
36	MYC	chr21:45751903-45752119	MCF10A-Er-Src	breast:	n/a	n/a
37	POLR2A	chr21:45747126-45752086	PFSK-1	brain:	n/a	n/a
38	POLR2A	chr21:45751719-45755472	K562	blood:	n/a	n/a
39	MAX	chr21:45751652-45752207	MCF-7	breast:	n/a	n/a
40	POLR2A	chr21:45746328-45752219	K562	blood:	n/a	n/a
41	POLR2A	chr21:45751506-45752182	Hela-S3	cervix:	n/a	n/a
42	MAX	chr21:45751794-45752136	NB4	blood:	n/a	n/a
43	MXI1	chr21:45751612-45752366	IMR90	lung:	n/a	n/a
44	POLR2A	chr21:45747398-45753018	U87	brain:	n/a	n/a
45	POLR2A	chr21:45749765-45752152	ECC-1	luminal epithelium:	n/a	n/a
46	POLR2A	chr21:45746806-45752899	HL-60	blood:	n/a	n/a
47	BHLHE40	chr21:45751810-45752136	K562	blood:	n/a	n/a
48	POU2F2	chr21:45751035-45752163	GM12891	blood:	n/a	n/a
49	MTA3	chr21:45751756-45752112	GM12878	blood:	n/a	n/a
50	POLR2A	chr21:45746506-45752164	GM12878	blood:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:45552255..45555608-chr21:45751000..45753544,3	K562	blood:

No data

Variant related genes	Relation type
C21orf2	TF binding region
ENSG00000241728	TF binding region
ENSG00000160221	Chromatin interaction

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11552068	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11910268	0.82[ASN][1000 genomes]
rs28490517	1.00[ASN][1000 genomes]
rs2876959	0.93[ASN][1000 genomes]
rs45455599	0.82[ASN][1000 genomes]
rs45542934	0.82[ASN][1000 genomes]
rs45614632	0.82[ASN][1000 genomes]
rs56249294	0.87[ASN][1000 genomes]
rs59125000	0.85[ASN][1000 genomes]
rs59596996	1.00[ASN][1000 genomes]
rs73907165	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73907166	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73907168	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73907170	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73907172	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73907173	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73907174	1.00[ASN][1000 genomes]
rs9977970	1.00[ASN][1000 genomes]
rs9978250	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33817	chr21:45169412-46031810	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
2	nsv1064420	chr21:45460089-45814986	Enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	nsv544472	chr21:45460089-45814986	Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
4	nsv432155	chr21:45479055-45772388	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
5	esv1825445	chr21:45535566-45754936	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
6	esv1817474	chr21:45540607-45773102	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
7	nsv533679	chr21:45551026-45768578	Enhancers Active TSS Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
8	nsv913898	chr21:45555079-45941566	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	74 gene(s)	inside rSNPs	diseases
9	nsv428042	chr21:45560437-45848190	Enhancers Active TSS Genic enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
10	nsv459295	chr21:45629565-45849864	Genic enhancers Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
11	nsv587740	chr21:45629565-45849864	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
12	nsv913906	chr21:45657970-45818609	Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	diseases
13	nsv531555	chr21:45665972-45757659	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
14	esv3361489	chr21:45669073-46013747	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
15	nsv913910	chr21:45681153-45787250	Bivalent Enhancer Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
16	nsv913911	chr21:45681153-45893907	Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
17	nsv913912	chr21:45687581-45768598	Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
18	nsv913913	chr21:45687581-45787250	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
19	nsv913916	chr21:45697755-45752176	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
20	nsv913917	chr21:45697755-45787250	Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
21	nsv913918	chr21:45697755-45941566	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
22	nsv913919	chr21:45699404-45752176	Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
23	nsv913920	chr21:45699404-45824792	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
24	nsv913921	chr21:45699404-45854431	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
25	nsv913922	chr21:45699404-45893907	Genic enhancers Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
26	nsv913925	chr21:45700641-45752176	Flanking Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
27	nsv913926	chr21:45700641-45764397	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
28	nsv913927	chr21:45700641-45787250	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
29	nsv913928	chr21:45700641-45811343	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
30	nsv913929	chr21:45700641-45860912	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
31	nsv913930	chr21:45700641-45893907	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
32	nsv913931	chr21:45703660-45764397	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
33	nsv913932	chr21:45703660-45787250	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
34	nsv913933	chr21:45703660-45811343	ZNF genes & repeats Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
35	nsv913935	chr21:45709153-45787250	Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
36	nsv913936	chr21:45709153-45811343	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
37	nsv913937	chr21:45709153-45865167	Genic enhancers Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
38	nsv913938	chr21:45712588-45787250	Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
39	nsv913939	chr21:45712588-45818609	Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
40	nsv913940	chr21:45712588-45893907	Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
41	nsv587780	chr21:45722442-45764397	Weak transcription Genic enhancers Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
42	nsv913941	chr21:45722442-45885589	ZNF genes & repeats Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
43	nsv1058359	chr21:45724055-45941566	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
44	nsv1065203	chr21:45731690-45941566	Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
45	nsv544473	chr21:45731690-45941566	Flanking Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
46	nsv913942	chr21:45740823-45941566	Strong transcription ZNF genes & repeats Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
47	nsv913943	chr21:45740823-46031810	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
48	nsv1059107	chr21:45749304-45813036	Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:45721000-45757600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr21:45725000-45758000	Weak transcription	Right Atrium	heart
3	chr21:45725600-45752800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
4	chr21:45725800-45757400	Strong transcription	Thymus	Thymus
5	chr21:45726200-45753200	Strong transcription	Fetal Stomach	stomach
6	chr21:45726600-45753200	Strong transcription	Gastric	stomach
7	chr21:45726600-45757200	Strong transcription	Fetal Intestine Small	intestine
8	chr21:45729400-45752800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
9	chr21:45731400-45757800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr21:45731400-45758000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr21:45731400-45758000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr21:45731400-45758000	Weak transcription	A549	lung
13	chr21:45731600-45756200	Weak transcription	Osteobl	bone
14	chr21:45731600-45758000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr21:45731800-45757600	Weak transcription	Fetal Kidney	kidney
16	chr21:45731800-45758000	Weak transcription	HSMM	muscle
17	chr21:45732600-45753600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr21:45733400-45758000	Weak transcription	Psoas Muscle	Psoas
19	chr21:45734000-45758000	Weak transcription	HUVEC	blood vessel
20	chr21:45734200-45757800	Weak transcription	Hela-S3	cervix
21	chr21:45734400-45758000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
22	chr21:45736600-45757200	Strong transcription	Lung	lung
23	chr21:45738400-45756200	Weak transcription	HSMMtube	muscle
24	chr21:45740200-45758000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
25	chr21:45740800-45754600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr21:45743000-45759000	Weak transcription	Primary B cells from cord blood	blood
27	chr21:45744000-45755000	Weak transcription	HepG2	liver
28	chr21:45744200-45757800	Weak transcription	GM12878-XiMat	blood
29	chr21:45744600-45757800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
30	chr21:45744800-45756000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr21:45745200-45757000	Weak transcription	K562	blood
32	chr21:45745400-45756000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr21:45745400-45759000	Weak transcription	Small Intestine	intestine
34	chr21:45745600-45757800	Weak transcription	HMEC	breast
35	chr21:45745800-45754600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr21:45745800-45757800	Weak transcription	HUES48 Cell Line	embryonic stem cell
37	chr21:45745800-45758200	Weak transcription	H9 Cell Line	embryonic stem cell
38	chr21:45746000-45757800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr21:45746200-45757800	Weak transcription	Stomach Mucosa	stomach
40	chr21:45746400-45756200	Weak transcription	Muscle Satellite Cultured Cells	--
41	chr21:45746400-45758000	Weak transcription	Rectal Mucosa Donor 31	rectum
42	chr21:45746600-45758200	Weak transcription	Primary hematopoietic stem cells	blood
43	chr21:45747000-45756200	Weak transcription	HUES64 Cell Line	embryonic stem cell
44	chr21:45747400-45752200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
45	chr21:45747600-45753400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr21:45747600-45754800	Weak transcription	Cortex derived primary cultured neurospheres	brain
47	chr21:45747600-45755200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr21:45747600-45755600	Weak transcription	Primary monocytes fromperipheralblood	blood
49	chr21:45747600-45756000	Weak transcription	Monocytes-CD14+_RO01746	blood
50	chr21:45747600-45758200	Weak transcription	Aorta	Aorta

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