Variant report

Variant rs9978250
Chromosome Location chr21:45774757-45774758
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45770200-45774800 Weak transcription Right Atrium heart
2 chr21:45770600-45774800 Weak transcription Gastric stomach
3 chr21:45771200-45795800 Weak transcription Brain Angular Gyrus brain
4 chr21:45771400-45775600 Enhancers Spleen Spleen
5 chr21:45771800-45788800 Weak transcription Brain Inferior Temporal Lobe brain
6 chr21:45772000-45775000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr21:45772200-45775800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr21:45772200-45776000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr21:45772200-45777200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr21:45772600-45774800 Flanking Active TSS Primary monocytes fromperipheralblood blood
11 chr21:45772800-45775600 Active TSS Brain Hippocampus Middle brain
12 chr21:45773000-45774800 Flanking Active TSS Primary T cells from cord blood blood
13 chr21:45773000-45775600 Flanking Active TSS Primary B cells from cord blood blood
14 chr21:45773200-45775400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr21:45773400-45775400 Active TSS Rectal Mucosa Donor 29 rectum
16 chr21:45773600-45774800 Active TSS Brain Anterior Caudate brain
17 chr21:45773600-45775200 Bivalent Enhancer HepG2 liver
18 chr21:45773600-45775600 Enhancers Primary T helper 17 cells PMA-I stimulated --
19 chr21:45773800-45775400 Enhancers Primary T regulatory cells fromperipheralblood blood
20 chr21:45773800-45775400 Enhancers Liver Liver
21 chr21:45773800-45775600 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr21:45773800-45775800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr21:45773800-45775800 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr21:45773800-45775800 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr21:45773800-45775800 Enhancers Dnd41 blood
26 chr21:45773800-45776200 Enhancers Thymus Thymus
27 chr21:45774000-45774800 Active TSS Colonic Mucosa Colon
28 chr21:45774000-45775800 Enhancers Primary T cells fromperipheralblood blood
29 chr21:45774000-45776000 Enhancers Primary T helper cells fromperipheralblood blood
30 chr21:45774000-45777200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr21:45774200-45774800 Weak transcription Lung lung
32 chr21:45774200-45775000 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr21:45774200-45775200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr21:45774200-45775400 Enhancers Primary Natural Killer cells fromperipheralblood blood
35 chr21:45774200-45775400 Bivalent Enhancer Fetal Muscle Trunk muscle
36 chr21:45774200-45776800 Enhancers Primary hematopoietic stem cells blood
37 chr21:45774200-45782200 Weak transcription Fetal Intestine Small intestine
38 chr21:45774400-45774800 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr21:45774400-45774800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr21:45774400-45774800 Flanking Active TSS Duodenum Mucosa Duodenum
41 chr21:45774400-45775600 Bivalent Enhancer Fetal Muscle Leg muscle
42 chr21:45774400-45775600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
43 chr21:45774400-45775800 Enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr21:45774400-45776400 Enhancers Primary B cells from peripheral blood blood
45 chr21:45774400-45776600 Enhancers Primary T helper cells PMA-I stimulated --
46 chr21:45774400-45777200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr21:45774400-45787600 Weak transcription Brain Cingulate Gyrus brain
48 chr21:45774600-45774800 Enhancers Skeletal Muscle Female skeletal muscle
49 chr21:45774600-45775600 Genic enhancers Primary hematopoietic stem cells short term culture blood
50 chr21:45774600-45775600 Enhancers Adipose Nuclei Adipose

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