Variant report

Variant	rs73919301
Chromosome Location	chr2:21689386-21689387
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs56334110	1.00[AFR][1000 genomes]
rs61136687	1.00[AMR][1000 genomes]
rs73919253	1.00[AFR][1000 genomes]
rs73921226	1.00[AMR][1000 genomes]
rs73921231	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011486	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv535602	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21646800-21690600	Weak transcription	Aorta	Aorta
2	chr2:21686000-21689400	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr2:21688600-21692800	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr2:21688800-21689800	Enhancers	Fetal Lung	lung
5	chr2:21688800-21692800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr2:21689000-21690800	Enhancers	NHLF	lung
7	chr2:21689200-21689800	Enhancers	Fetal Stomach	stomach
8	chr2:21689200-21689800	Enhancers	Rectal Smooth Muscle	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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