Variant report

Variant	rs73934751
Chromosome Location	chr2:63902499-63902500
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73937814	1.00[AMR][1000 genomes]
rs7565002	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834242	chr2:63891249-64045617	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:63891800-63903400	Weak transcription	Aorta	Aorta
2	chr2:63896400-63903400	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr2:63896400-63907200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr2:63896400-63911400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr2:63900400-63903200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr2:63900400-63904000	Enhancers	Adipose Nuclei	Adipose
7	chr2:63901000-63907000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr2:63901200-63902600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr2:63901200-63903400	Weak transcription	Pancreas	Pancrea
10	chr2:63901400-63904200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr2:63901400-63907400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr2:63901800-63902800	Enhancers	Liver	Liver
13	chr2:63902400-63902800	Enhancers	Fetal Stomach	stomach
14	chr2:63902400-63903600	Enhancers	Colon Smooth Muscle	Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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