The 2.0 version of rSNPBase

Variant report

Variant rs73942288
Chromosome Location chr2:58287508-58287509
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:58274600-58298600 Weak transcription Spleen Spleen
2 chr2:58274600-58302400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:58274800-58296400 Weak transcription Ovary ovary
4 chr2:58274800-58296600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:58274800-58302200 Weak transcription Aorta Aorta
6 chr2:58274800-58317400 Weak transcription Fetal Muscle Trunk muscle
7 chr2:58275000-58287800 Weak transcription Fetal Kidney kidney
8 chr2:58275000-58290800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr2:58275000-58290800 Weak transcription Thymus Thymus
10 chr2:58275000-58291000 Weak transcription HSMM muscle
11 chr2:58275000-58297600 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr2:58275000-58302600 Weak transcription Esophagus oesophagus
13 chr2:58275000-58302800 Weak transcription Fetal Stomach stomach
14 chr2:58275000-58305600 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr2:58275000-58317400 Weak transcription Colon Smooth Muscle Colon
16 chr2:58275000-58321600 Weak transcription Rectal Smooth Muscle rectum
17 chr2:58275000-58326600 Weak transcription Pancreas Pancrea
18 chr2:58275400-58290000 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr2:58275400-58290600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr2:58275400-58290600 Weak transcription Placenta Amnion Placenta Amnion
21 chr2:58275400-58290800 Weak transcription Brain Anterior Caudate brain
22 chr2:58275400-58291000 Weak transcription NH-A brain
23 chr2:58275400-58294400 Weak transcription Fetal Intestine Small intestine
24 chr2:58275600-58289000 Weak transcription Duodenum Mucosa Duodenum
25 chr2:58275600-58289800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:58275600-58291000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr2:58275600-58291000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr2:58275600-58293800 Weak transcription Small Intestine intestine
29 chr2:58275800-58290600 Weak transcription Muscle Satellite Cultured Cells --
30 chr2:58275800-58316800 Weak transcription HMEC breast
31 chr2:58276200-58289600 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr2:58276400-58290200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr2:58276800-58290600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr2:58277000-58290400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr2:58277600-58290400 Weak transcription Osteobl bone
36 chr2:58279000-58319000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr2:58279400-58315600 Weak transcription Dnd41 blood
38 chr2:58281000-58297800 Weak transcription Fetal Lung lung
39 chr2:58281800-58288000 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr2:58282000-58287800 Strong transcription A549 lung
41 chr2:58282200-58287600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:58282200-58291400 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr2:58282400-58291000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr2:58282400-58300400 Weak transcription Stomach Smooth Muscle stomach
45 chr2:58282400-58301400 Weak transcription Lung lung
46 chr2:58282600-58350400 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr2:58283000-58290400 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr2:58283200-58290600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr2:58283400-58294400 Strong transcription Primary B cells from cord blood blood
50 chr2:58283400-58296600 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015