Variant report

Variant	rs73945610
Chromosome Location	chr2:72896743-72896744
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17008355	0.87[EUR][1000 genomes]
rs7576726	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874264	chr2:72593243-72901170	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv874265	chr2:72789764-72982609	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:72858400-72904000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr2:72866800-72902600	Weak transcription	Left Ventricle	heart
3	chr2:72873000-72903800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr2:72892000-72905400	Weak transcription	Pancreas	Pancrea
5	chr2:72892400-72900400	Weak transcription	Ovary	ovary
6	chr2:72895400-72897000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr2:72895400-72897200	Enhancers	Hela-S3	cervix
8	chr2:72895400-72902600	Weak transcription	Fetal Lung	lung
9	chr2:72895600-72897000	Enhancers	HMEC	breast
10	chr2:72895600-72897000	Enhancers	Osteobl	bone
11	chr2:72895800-72897000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr2:72895800-72900400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr2:72895800-72901200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr2:72895800-72903400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr2:72896000-72896800	Enhancers	NHEK	skin
16	chr2:72896000-72897000	Enhancers	NHDF-Ad	bronchial
17	chr2:72896000-72897000	Enhancers	NHLF	lung
18	chr2:72896000-72905400	Weak transcription	Psoas Muscle	Psoas
19	chr2:72896400-72896800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr2:72896400-72896800	Flanking Active TSS	A549	lung
21	chr2:72896600-72896800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr2:72896600-72897000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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