Variant report

Variant	rs73955098
Chromosome Location	chr2:114612731-114612732
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:114612352..114613856-chr2:114615022..114617998,2	K562	blood:
2	chr2:114605600..114609887-chr2:114610932..114615249,5	K562	blood:

Variant related genes	Relation type
ENSG00000239077	Chromatin interaction

rs_ID	r²[population]
rs60313988	0.89[AFR][1000 genomes]
rs61704468	0.87[AFR][1000 genomes]
rs73955096	0.94[AFR][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114596400-114621000	Weak transcription	Aorta	Aorta
2	chr2:114596800-114632800	Weak transcription	Primary T helper cells fromperipheralblood	blood
3	chr2:114597600-114631400	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr2:114602800-114626000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr2:114603800-114616000	Weak transcription	Spleen	Spleen
6	chr2:114603800-114631200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr2:114605400-114616000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr2:114606200-114621800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr2:114607000-114616200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr2:114607200-114615200	Weak transcription	Osteobl	bone
11	chr2:114607200-114615800	Weak transcription	HMEC	breast
12	chr2:114608600-114615200	Weak transcription	Pancreas	Pancrea
13	chr2:114609600-114614600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr2:114610200-114614400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr2:114610400-114613400	Enhancers	Primary B cells from cord blood	blood
16	chr2:114611600-114623400	Enhancers	Primary B cells from peripheral blood	blood
17	chr2:114612000-114613400	Strong transcription	Primary T cells from cord blood	blood
18	chr2:114612200-114613000	Enhancers	Primary hematopoietic stem cells	blood
19	chr2:114612200-114613200	Enhancers	Fetal Thymus	thymus
20	chr2:114612200-114613600	Enhancers	Primary monocytes fromperipheralblood	blood
21	chr2:114612200-114613600	Enhancers	Monocytes-CD14+_RO01746	blood
22	chr2:114612400-114612800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr2:114612400-114612800	Enhancers	Rectal Mucosa Donor 31	rectum
24	chr2:114612400-114612800	Enhancers	Thymus	Thymus
25	chr2:114612400-114612800	Bivalent Enhancer	HepG2	liver
26	chr2:114612400-114613200	Enhancers	Primary neutrophils fromperipheralblood	blood
27	chr2:114612400-114613200	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr2:114612400-114613200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
29	chr2:114612400-114613400	Enhancers	GM12878-XiMat	blood
30	chr2:114612600-114613200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr2:114612600-114613200	Enhancers	K562	blood
32	chr2:114612600-114615000	Weak transcription	Sigmoid Colon	Sigmoid Colon

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