The 2.0 version of rSNPBase

Variant report

Variant rs60313988
Chromosome Location chr2:114625762-114625763
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114596800-114632800 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr2:114597600-114631400 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr2:114602800-114626000 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr2:114603800-114631200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr2:114612800-114626000 Weak transcription Thymus Thymus
6 chr2:114613200-114631400 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr2:114619000-114631400 Weak transcription Primary T cells from cord blood blood
8 chr2:114621200-114639600 Weak transcription GM12878-XiMat blood
9 chr2:114621400-114638400 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr2:114623200-114625800 Weak transcription Primary B cells from cord blood blood
11 chr2:114623600-114628800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr2:114625000-114625800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:114625000-114626200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:114625000-114626200 Enhancers Rectal Mucosa Donor 31 rectum
15 chr2:114625000-114626800 Enhancers Primary B cells from peripheral blood blood
16 chr2:114625200-114625800 Enhancers Fetal Intestine Small intestine
17 chr2:114625200-114625800 Enhancers Sigmoid Colon Sigmoid Colon
18 chr2:114625200-114625800 Enhancers Stomach Mucosa stomach
19 chr2:114625200-114626200 Enhancers Duodenum Mucosa Duodenum
20 chr2:114625400-114625800 Enhancers Rectal Mucosa Donor 29 rectum
21 chr2:114625400-114626600 Enhancers Monocytes-CD14+_RO01746 blood
22 chr2:114625400-114626800 Enhancers Primary monocytes fromperipheralblood blood
23 chr2:114625600-114626000 Enhancers Primary neutrophils fromperipheralblood blood
24 chr2:114625600-114626000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
25 chr2:114625600-114626200 Flanking Active TSS HepG2 liver

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Last update: Aug 31, 2015