The 2.0 version of rSNPBase

Variant report

Variant rs11889598
Chromosome Location chr2:114661301-114661302
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114648600-114667600 Weak transcription Lung lung
2 chr2:114649200-114673200 Weak transcription Placenta Placenta
3 chr2:114652000-114667600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr2:114652000-114667600 Weak transcription Esophagus oesophagus
5 chr2:114652200-114700600 Weak transcription Fetal Brain Male brain
6 chr2:114652400-114686000 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:114653200-114662400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr2:114653400-114662000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:114653400-114672600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr2:114653600-114734800 Weak transcription H9 Cell Line embryonic stem cell
11 chr2:114654000-114670000 Enhancers Primary neutrophils fromperipheralblood blood
12 chr2:114654400-114667600 Weak transcription Thymus Thymus
13 chr2:114654600-114674600 Weak transcription Hela-S3 cervix
14 chr2:114654600-114675400 Weak transcription Fetal Stomach stomach
15 chr2:114654800-114663400 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr2:114654800-114666800 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr2:114655400-114663000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:114655600-114661800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr2:114655600-114665400 Enhancers Primary monocytes fromperipheralblood blood
20 chr2:114655600-114665800 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr2:114655600-114667600 Weak transcription HMEC breast
22 chr2:114655600-114667800 Weak transcription Fetal Intestine Small intestine
23 chr2:114655800-114661800 Weak transcription Fetal Brain Female brain
24 chr2:114655800-114662000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr2:114655800-114665000 Weak transcription Ovary ovary
26 chr2:114655800-114672600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr2:114655800-114672600 Weak transcription NHEK skin
28 chr2:114656000-114661800 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr2:114656000-114662200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr2:114656600-114661800 Weak transcription Brain Anterior Caudate brain
31 chr2:114656600-114664600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr2:114656600-114668000 Weak transcription NHLF lung
33 chr2:114656800-114670800 Weak transcription Dnd41 blood
34 chr2:114657200-114661400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:114657200-114661600 Weak transcription HUVEC blood vessel
36 chr2:114657400-114661400 Weak transcription Brain Germinal Matrix brain
37 chr2:114657400-114661800 Weak transcription NHDF-Ad bronchial
38 chr2:114657400-114662000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:114657600-114663600 Weak transcription Fetal Lung lung
40 chr2:114658000-114661800 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr2:114658000-114661800 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr2:114658000-114665000 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr2:114658000-114667800 Weak transcription Rectal Smooth Muscle rectum
44 chr2:114658000-114675400 Weak transcription Aorta Aorta
45 chr2:114658000-114689400 Weak transcription Fetal Heart heart
46 chr2:114658200-114661800 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr2:114658200-114665000 Weak transcription Psoas Muscle Psoas
48 chr2:114658200-114667600 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr2:114658200-114668000 Weak transcription Muscle Satellite Cultured Cells --
50 chr2:114658400-114661400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015