Variant report

Variant	rs55898668
Chromosome Location	chr2:114601731-114601732
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10176845	1.00[EUR][1000 genomes]
rs10187400	1.00[EUR][1000 genomes]
rs10496457	1.00[EUR][1000 genomes]
rs11889509	1.00[EUR][1000 genomes]
rs11889598	1.00[EUR][1000 genomes]
rs11891411	1.00[EUR][1000 genomes]
rs11891462	1.00[EUR][1000 genomes]
rs11894827	1.00[EUR][1000 genomes]
rs11895599	1.00[EUR][1000 genomes]
rs12105197	1.00[EUR][1000 genomes]
rs13384052	1.00[EUR][1000 genomes]
rs17045715	1.00[EUR][1000 genomes]
rs17045864	1.00[EUR][1000 genomes]
rs17046832	1.00[EUR][1000 genomes]
rs17048352	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4255968	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55641866	1.00[EUR][1000 genomes]
rs55871409	1.00[EUR][1000 genomes]
rs55926723	1.00[EUR][1000 genomes]
rs55952342	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55959179	1.00[EUR][1000 genomes]
rs55969528	1.00[EUR][1000 genomes]
rs56235472	1.00[EUR][1000 genomes]
rs57250836	1.00[EUR][1000 genomes]
rs57443397	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58242493	1.00[EUR][1000 genomes]
rs58556274	1.00[EUR][1000 genomes]
rs59403353	1.00[EUR][1000 genomes]
rs59858371	1.00[EUR][1000 genomes]
rs60313988	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60779750	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60798508	1.00[EUR][1000 genomes]
rs60896642	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60967736	1.00[EUR][1000 genomes]
rs61113571	1.00[EUR][1000 genomes]
rs61179082	1.00[EUR][1000 genomes]
rs61516254	1.00[EUR][1000 genomes]
rs61704468	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6743688	1.00[EUR][1000 genomes]
rs72948697	1.00[EUR][1000 genomes]
rs72954522	1.00[EUR][1000 genomes]
rs72954542	1.00[EUR][1000 genomes]
rs72954545	1.00[EUR][1000 genomes]
rs72954552	1.00[EUR][1000 genomes]
rs72954575	1.00[EUR][1000 genomes]
rs73955093	1.00[EUR][1000 genomes]
rs73955096	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73955101	1.00[EUR][1000 genomes]
rs73955102	1.00[EUR][1000 genomes]
rs73955460	1.00[EUR][1000 genomes]
rs73955469	1.00[EUR][1000 genomes]
rs73957403	1.00[EUR][1000 genomes]
rs73957404	1.00[EUR][1000 genomes]
rs73957406	1.00[EUR][1000 genomes]
rs73957408	1.00[EUR][1000 genomes]
rs73957425	1.00[EUR][1000 genomes]
rs73957426	1.00[EUR][1000 genomes]
rs73957431	1.00[EUR][1000 genomes]
rs73957432	1.00[EUR][1000 genomes]
rs73957433	1.00[EUR][1000 genomes]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114574200-114603600	Weak transcription	Primary B cells from cord blood	blood
2	chr2:114596400-114621000	Weak transcription	Aorta	Aorta
3	chr2:114596600-114603400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
4	chr2:114596600-114611600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr2:114596800-114632800	Weak transcription	Primary T helper cells fromperipheralblood	blood
6	chr2:114597600-114631400	Weak transcription	Primary T helper cells PMA-I stimulated	--
7	chr2:114600000-114601800	Enhancers	Placenta	Placenta
8	chr2:114600000-114602600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr2:114600200-114602000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr2:114601200-114602000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr2:114601200-114602200	Enhancers	HMEC	breast
12	chr2:114601200-114606200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr2:114601200-114606800	Weak transcription	NHLF	lung
14	chr2:114601400-114601800	Enhancers	NHEK	skin
15	chr2:114601400-114602400	Enhancers	NHDF-Ad	bronchial
16	chr2:114601400-114602800	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr2:114601400-114612000	Weak transcription	Primary T cells from cord blood	blood
18	chr2:114601600-114601800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr2:114601600-114601800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr2:114601600-114601800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr2:114601600-114601800	Enhancers	Osteobl	bone
22	chr2:114601600-114606400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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