Variant report

Variant	rs72948697
Chromosome Location	chr2:114591972-114591973
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ESR1	chr2:114591662-114592105	ECC-1	luminal epithelium:	n/a	n/a
2	TEAD4	chr2:114591569-114592036	ECC-1	luminal epithelium:	n/a	n/a
3	CEBPB	chr2:114591639-114591975	ECC-1	luminal epithelium:	n/a	n/a
4	ESR1	chr2:114591533-114592059	ECC-1	luminal epithelium:	n/a	n/a
5	TCF12	chr2:114591626-114592106	ECC-1	luminal epithelium:	n/a	n/a
6	TEAD4	chr2:114591481-114592091	ECC-1	luminal epithelium:	n/a	n/a
7	ESR1	chr2:114591670-114592041	ECC-1	luminal epithelium:	n/a	n/a
8	EP300	chr2:114591472-114592075	ECC-1	luminal epithelium:	n/a	n/a

Variant related genes	Relation type
ENSG00000244063	TF binding region
ENSG00000228857	TF binding region

rs_ID	r²[population]
rs10176845	1.00[EUR][1000 genomes]
rs10187400	1.00[EUR][1000 genomes]
rs10496457	1.00[EUR][1000 genomes]
rs11889509	1.00[EUR][1000 genomes]
rs11889598	1.00[EUR][1000 genomes]
rs11891411	1.00[EUR][1000 genomes]
rs11891462	1.00[EUR][1000 genomes]
rs11894827	1.00[EUR][1000 genomes]
rs11895599	1.00[EUR][1000 genomes]
rs12105197	1.00[EUR][1000 genomes]
rs13384052	1.00[EUR][1000 genomes]
rs17045715	1.00[EUR][1000 genomes]
rs17045864	1.00[EUR][1000 genomes]
rs17046832	1.00[EUR][1000 genomes]
rs17048352	1.00[EUR][1000 genomes]
rs4255968	1.00[EUR][1000 genomes]
rs55641866	1.00[EUR][1000 genomes]
rs55871409	1.00[EUR][1000 genomes]
rs55898668	1.00[EUR][1000 genomes]
rs55926723	1.00[EUR][1000 genomes]
rs55952342	1.00[EUR][1000 genomes]
rs55959179	1.00[EUR][1000 genomes]
rs55969528	1.00[EUR][1000 genomes]
rs56235472	1.00[EUR][1000 genomes]
rs57250836	1.00[EUR][1000 genomes]
rs57443397	1.00[EUR][1000 genomes]
rs58242493	1.00[EUR][1000 genomes]
rs58556274	1.00[EUR][1000 genomes]
rs59403353	1.00[EUR][1000 genomes]
rs59858371	1.00[EUR][1000 genomes]
rs60313988	1.00[EUR][1000 genomes]
rs60779750	1.00[EUR][1000 genomes]
rs60798508	1.00[EUR][1000 genomes]
rs60896642	1.00[EUR][1000 genomes]
rs60967736	1.00[EUR][1000 genomes]
rs61113571	1.00[EUR][1000 genomes]
rs61179082	1.00[EUR][1000 genomes]
rs61516254	1.00[EUR][1000 genomes]
rs61704468	1.00[EUR][1000 genomes]
rs6743688	1.00[EUR][1000 genomes]
rs72954522	1.00[EUR][1000 genomes]
rs72954542	1.00[EUR][1000 genomes]
rs72954545	1.00[EUR][1000 genomes]
rs72954552	1.00[EUR][1000 genomes]
rs72954575	1.00[EUR][1000 genomes]
rs73955093	1.00[EUR][1000 genomes]
rs73955096	1.00[EUR][1000 genomes]
rs73955101	1.00[EUR][1000 genomes]
rs73955102	1.00[EUR][1000 genomes]
rs73955460	1.00[EUR][1000 genomes]
rs73955469	1.00[EUR][1000 genomes]
rs73957403	1.00[EUR][1000 genomes]
rs73957404	1.00[EUR][1000 genomes]
rs73957406	1.00[EUR][1000 genomes]
rs73957408	1.00[EUR][1000 genomes]
rs73957425	1.00[EUR][1000 genomes]
rs73957426	1.00[EUR][1000 genomes]
rs73957431	1.00[EUR][1000 genomes]
rs73957432	1.00[EUR][1000 genomes]
rs73957433	1.00[EUR][1000 genomes]

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114574200-114603600	Weak transcription	Primary B cells from cord blood	blood
2	chr2:114584600-114595600	Weak transcription	HepG2	liver
3	chr2:114584800-114592000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr2:114586400-114601000	Weak transcription	Primary T cells from cord blood	blood
5	chr2:114589200-114592000	Weak transcription	HMEC	breast
6	chr2:114589200-114596400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr2:114589200-114600200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr2:114589200-114600200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr2:114589200-114600200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr2:114591200-114592800	Enhancers	Placenta	Placenta
11	chr2:114591400-114592000	Enhancers	Fetal Intestine Large	intestine
12	chr2:114591400-114592600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr2:114591600-114592400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
14	chr2:114591600-114592600	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr2:114591600-114597800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr2:114591800-114592800	Enhancers	Primary monocytes fromperipheralblood	blood

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