The 2.0 version of rSNPBase

Variant report

Variant rs57443397
Chromosome Location chr2:114665733-114665734
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114648600-114667600 Weak transcription Lung lung
2 chr2:114649200-114673200 Weak transcription Placenta Placenta
3 chr2:114652000-114667600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr2:114652000-114667600 Weak transcription Esophagus oesophagus
5 chr2:114652200-114700600 Weak transcription Fetal Brain Male brain
6 chr2:114652400-114686000 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:114653400-114672600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr2:114653600-114734800 Weak transcription H9 Cell Line embryonic stem cell
9 chr2:114654000-114670000 Enhancers Primary neutrophils fromperipheralblood blood
10 chr2:114654400-114667600 Weak transcription Thymus Thymus
11 chr2:114654600-114674600 Weak transcription Hela-S3 cervix
12 chr2:114654600-114675400 Weak transcription Fetal Stomach stomach
13 chr2:114654800-114666800 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr2:114655600-114665800 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr2:114655600-114667600 Weak transcription HMEC breast
16 chr2:114655600-114667800 Weak transcription Fetal Intestine Small intestine
17 chr2:114655800-114672600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr2:114655800-114672600 Weak transcription NHEK skin
19 chr2:114656600-114668000 Weak transcription NHLF lung
20 chr2:114656800-114670800 Weak transcription Dnd41 blood
21 chr2:114658000-114667800 Weak transcription Rectal Smooth Muscle rectum
22 chr2:114658000-114675400 Weak transcription Aorta Aorta
23 chr2:114658000-114689400 Weak transcription Fetal Heart heart
24 chr2:114658200-114667600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr2:114658200-114668000 Weak transcription Muscle Satellite Cultured Cells --
26 chr2:114658400-114671200 Weak transcription Osteobl bone
27 chr2:114658400-114674200 Weak transcription Fetal Intestine Large intestine
28 chr2:114658800-114667600 Weak transcription Gastric stomach
29 chr2:114659000-114667600 Weak transcription Pancreas Pancrea
30 chr2:114659000-114671200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr2:114659800-114667600 Weak transcription Brain Hippocampus Middle brain
32 chr2:114660000-114667400 Weak transcription Brain Substantia Nigra brain
33 chr2:114660200-114671000 Weak transcription NH-A brain
34 chr2:114661000-114667800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:114661000-114671000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:114661200-114666800 Weak transcription Duodenum Mucosa Duodenum
37 chr2:114661200-114667400 Weak transcription Stomach Mucosa stomach
38 chr2:114661200-114667600 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr2:114661200-114667800 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr2:114661200-114683800 Weak transcription Colonic Mucosa Colon
41 chr2:114661400-114667400 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr2:114661600-114666800 Weak transcription Colon Smooth Muscle Colon
43 chr2:114661600-114670800 Weak transcription Fetal Thymus thymus
44 chr2:114661800-114667200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr2:114661800-114667600 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr2:114662000-114667200 Weak transcription Brain Angular Gyrus brain
47 chr2:114662200-114675200 Weak transcription H1 Cell Line embryonic stem cell
48 chr2:114662400-114667800 Weak transcription Brain Anterior Caudate brain
49 chr2:114662400-114671000 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr2:114662400-114671000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015