Variant report

Variant rs739936
Chromosome Location chr11:16805226-16805227
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:16777200-16826000 Weak transcription Brain Substantia Nigra brain
2 chr11:16792000-16807000 Weak transcription Adipose Nuclei Adipose
3 chr11:16795800-16831400 Weak transcription Brain Germinal Matrix brain
4 chr11:16797000-16806000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr11:16797200-16837800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:16797600-16811200 Weak transcription H9 Cell Line embryonic stem cell
7 chr11:16797800-16813000 Weak transcription Ovary ovary
8 chr11:16798200-16807200 Strong transcription Fetal Intestine Large intestine
9 chr11:16798600-16813000 Weak transcription Brain Hippocampus Middle brain
10 chr11:16798800-16806000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr11:16798800-16807400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr11:16798800-16813000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr11:16799000-16842200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr11:16799400-16805400 Strong transcription Fetal Stomach stomach
15 chr11:16800000-16807600 Weak transcription A549 lung
16 chr11:16800600-16807200 Weak transcription Hela-S3 cervix
17 chr11:16800600-16813000 Weak transcription Thymus Thymus
18 chr11:16801400-16806400 Weak transcription Spleen Spleen
19 chr11:16801400-16808800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr11:16801400-16812200 Weak transcription H1 Cell Line embryonic stem cell
21 chr11:16801400-16816800 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr11:16801400-16833400 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr11:16801800-16806000 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr11:16801800-16807200 Weak transcription Stomach Mucosa stomach
25 chr11:16801800-16809800 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr11:16801800-16809800 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr11:16802000-16805600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr11:16802000-16807200 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr11:16802200-16805400 Strong transcription Liver Liver
30 chr11:16802200-16806000 Weak transcription Right Ventricle heart
31 chr11:16802200-16811200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr11:16802200-16827600 Weak transcription Brain Cingulate Gyrus brain
33 chr11:16802400-16805400 Strong transcription Placenta Placenta
34 chr11:16802400-16806000 Weak transcription Left Ventricle heart
35 chr11:16803000-16815400 Weak transcription Stomach Smooth Muscle stomach
36 chr11:16803200-16805400 Genic enhancers Pancreas Pancrea
37 chr11:16803400-16807200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr11:16803400-16826000 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr11:16803600-16805600 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr11:16803800-16842000 Weak transcription Fetal Kidney kidney
41 chr11:16804000-16805400 Strong transcription Brain Anterior Caudate brain
42 chr11:16804000-16805400 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr11:16804000-16805400 Strong transcription Sigmoid Colon Sigmoid Colon
44 chr11:16804000-16810200 Weak transcription Fetal Muscle Leg muscle
45 chr11:16804200-16805400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr11:16804200-16806600 Weak transcription NHEK skin
47 chr11:16804200-16807400 Strong transcription Duodenum Mucosa Duodenum
48 chr11:16804200-16808600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr11:16804400-16805400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr11:16804400-16805400 Weak transcription Breast Myoepithelial Primary Cells Breast

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