Variant report

Variant	rs74043099
Chromosome Location	chr13:30957261-30957262
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:30953052..30955513-chr13:30956447..30958351,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs74043098	1.00[AMR][1000 genomes]
rs74043100	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530602	chr13:30911025-31404272	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:30946600-30963600	Weak transcription	Fetal Intestine Large	intestine
2	chr13:30951400-30969400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr13:30951600-30964200	Weak transcription	Esophagus	oesophagus
4	chr13:30952400-30962000	Weak transcription	Primary B cells from cord blood	blood
5	chr13:30955600-30963200	Enhancers	Fetal Thymus	thymus
6	chr13:30955800-30957600	Enhancers	Primary T cells fromperipheralblood	blood
7	chr13:30955800-30958000	Enhancers	Primary T cells from cord blood	blood
8	chr13:30956000-30957800	Enhancers	Primary T killer memory cells from peripheral blood	blood
9	chr13:30956200-30958400	Enhancers	Primary T helper cells fromperipheralblood	blood
10	chr13:30956800-30957400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
11	chr13:30956800-30957400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr13:30956800-30958000	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr13:30956800-30958000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
14	chr13:30956800-30958000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
15	chr13:30956800-30958000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr13:30956800-30959600	Enhancers	Dnd41	blood
17	chr13:30957000-30957400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr13:30957000-30957400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr13:30957000-30957400	Enhancers	Spleen	Spleen
20	chr13:30957000-30957400	Enhancers	NHEK	skin
21	chr13:30957000-30957600	Enhancers	ES-I3 Cell Line	embryonic stem cell
22	chr13:30957000-30957600	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr13:30957000-30957600	Enhancers	Primary B cells from peripheral blood	blood
24	chr13:30957000-30957600	Enhancers	Primary hematopoietic stem cells short term culture	blood
25	chr13:30957000-30957600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
26	chr13:30957000-30957600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr13:30957000-30957600	Enhancers	Adipose Nuclei	Adipose
28	chr13:30957000-30957600	Enhancers	Liver	Liver
29	chr13:30957000-30957600	Enhancers	Duodenum Mucosa	Duodenum
30	chr13:30957000-30957600	Enhancers	Fetal Muscle Leg	muscle
31	chr13:30957000-30957600	Enhancers	Gastric	stomach
32	chr13:30957000-30957600	Enhancers	Rectal Mucosa Donor 29	rectum
33	chr13:30957000-30957600	Enhancers	Rectal Mucosa Donor 31	rectum
34	chr13:30957000-30957600	Enhancers	Sigmoid Colon	Sigmoid Colon
35	chr13:30957000-30957600	Enhancers	Skeletal Muscle Male	skeletal muscle
36	chr13:30957000-30957600	Enhancers	Stomach Mucosa	stomach
37	chr13:30957000-30957600	Flanking Active TSS	Thymus	Thymus
38	chr13:30957000-30957600	Enhancers	HepG2	liver
39	chr13:30957000-30958000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
40	chr13:30957000-30958200	Enhancers	Primary hematopoietic stem cells	blood
41	chr13:30957200-30957400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
42	chr13:30957200-30957400	Enhancers	Primary T helper cells PMA-I stimulated	--
43	chr13:30957200-30957400	Enhancers	Placenta	Placenta
44	chr13:30957200-30957800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr13:30957200-30963000	Weak transcription	Fetal Muscle Trunk	muscle

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