Variant report

Variant	rs74062759
Chromosome Location	chr12:9935978-9935979
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs3136562	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3176772	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3176777	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56116611	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57338882	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59258216	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7957102	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:9927600-9938800	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr12:9928400-9945400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr12:9929800-9936000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr12:9930000-9945400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr12:9930200-9945800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr12:9934400-9938400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr12:9934600-9937600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr12:9934600-9938200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr12:9934600-9939800	Weak transcription	Primary T cells from cord blood	blood
10	chr12:9934600-9940000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
11	chr12:9935200-9941200	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr12:9935400-9936000	Active TSS	ES-I3 Cell Line	embryonic stem cell
13	chr12:9935400-9936200	Enhancers	H9 Cell Line	embryonic stem cell
14	chr12:9935400-9936600	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr12:9935400-9938000	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr12:9935400-9940400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr12:9935600-9937400	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr12:9935800-9936800	Enhancers	HUES48 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links