Variant report

Variant	rs74063865
Chromosome Location	chr14:77714668-77714669
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:77712852..77714702-chr14:77715843..77718574,2	K562	blood:

Variant related genes	Relation type
ENSG00000165548	Chromatin interaction

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs28909974	1.00[AMR][1000 genomes]
rs28909975	1.00[AMR][1000 genomes]
rs28988616	1.00[AMR][1000 genomes]
rs56323742	0.85[AFR][1000 genomes]
rs57425664	1.00[AMR][1000 genomes]
rs61555950	1.00[AMR][1000 genomes]
rs74062794	1.00[AMR][1000 genomes]
rs74062879	1.00[AMR][1000 genomes]
rs74063854	0.85[AFR][1000 genomes]
rs74063856	0.92[AFR][1000 genomes]
rs74063858	0.93[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431017	chr14:76938089-77854647	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases
2	nsv832834	chr14:77554987-77724357	Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	nsv1361	chr14:77707417-77753024	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77697600-77726800	Weak transcription	Brain Substantia Nigra	brain
2	chr14:77698400-77720000	Weak transcription	Pancreas	Pancrea
3	chr14:77704800-77719200	Weak transcription	Brain Hippocampus Middle	brain
4	chr14:77708400-77720600	Strong transcription	Fetal Brain Female	brain
5	chr14:77708600-77714800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr14:77709000-77718400	Strong transcription	Brain Inferior Temporal Lobe	brain
7	chr14:77709800-77729600	Weak transcription	Fetal Brain Male	brain
8	chr14:77711000-77717600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr14:77711200-77731000	Weak transcription	Spleen	Spleen
10	chr14:77711800-77714800	Weak transcription	Brain Germinal Matrix	brain
11	chr14:77712400-77720800	Strong transcription	Pancreatic Islets	Pancreatic Islet
12	chr14:77712800-77720800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr14:77713000-77715400	Weak transcription	Fetal Intestine Small	intestine
14	chr14:77713200-77714800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr14:77713200-77726800	Weak transcription	Brain Cingulate Gyrus	brain
16	chr14:77713400-77720200	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr14:77713400-77720200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr14:77714000-77723400	Weak transcription	Fetal Intestine Large	intestine
19	chr14:77714200-77716200	Strong transcription	Brain Angular Gyrus	brain
20	chr14:77714400-77715600	Strong transcription	Esophagus	oesophagus
21	chr14:77714400-77715800	Strong transcription	Brain Anterior Caudate	brain
22	chr14:77714600-77715000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr14:77714600-77715400	Strong transcription	Primary monocytes fromperipheralblood	blood

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