The 2.0 version of rSNPBase

Variant report

Variant rs74076988
Chromosome Location chr1:63251449-63251450
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63248800-63252000 Active TSS Brain Hippocampus Middle brain
2 chr1:63248800-63252200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
3 chr1:63249000-63251800 Active TSS Brain Substantia Nigra brain
4 chr1:63249000-63252000 Active TSS Brain Anterior Caudate brain
5 chr1:63249000-63252000 Active TSS Brain Cingulate Gyrus brain
6 chr1:63249000-63252600 Active TSS Brain Inferior Temporal Lobe brain
7 chr1:63249400-63251800 Active TSS K562 blood
8 chr1:63250400-63254000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:63250600-63252600 Weak transcription Pancreas Pancrea
10 chr1:63250600-63262400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:63250600-63266600 Weak transcription Gastric stomach
12 chr1:63250800-63252000 Enhancers Primary T helper cells fromperipheralblood blood
13 chr1:63250800-63252000 Enhancers Fetal Heart heart
14 chr1:63250800-63252600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr1:63250800-63252600 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr1:63250800-63253200 Active TSS Brain Angular Gyrus brain
17 chr1:63250800-63319000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:63251000-63251600 Flanking Active TSS GM12878-XiMat blood
19 chr1:63251000-63251800 Weak transcription Thymus Thymus
20 chr1:63251000-63251800 Weak transcription HSMM muscle
21 chr1:63251000-63252000 Enhancers Primary B cells from cord blood blood
22 chr1:63251000-63252000 Enhancers Liver Liver
23 chr1:63251000-63252000 Enhancers NHEK skin
24 chr1:63251000-63252200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr1:63251000-63252400 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr1:63251000-63252400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:63251000-63252800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:63251000-63259600 Weak transcription Stomach Mucosa stomach
29 chr1:63251000-63266600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:63251000-63269600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:63251000-63272600 Weak transcription Fetal Muscle Leg muscle
32 chr1:63251000-63274800 Weak transcription Fetal Intestine Small intestine
33 chr1:63251000-63296000 Weak transcription Fetal Thymus thymus
34 chr1:63251000-63317800 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
36 chr1:63251200-63251600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr1:63251200-63252000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:63251200-63252000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:63251200-63252000 Enhancers Colon Smooth Muscle Colon
40 chr1:63251200-63252800 Enhancers HepG2 liver
41 chr1:63251200-63260200 Weak transcription Primary hematopoietic stem cells blood
42 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:63251400-63251600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:63251400-63251800 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr1:63251400-63252000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:63251400-63252200 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr1:63251400-63252400 Weak transcription Primary T cells from cord blood blood
48 chr1:63251400-63252800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:63251400-63252800 Enhancers Dnd41 blood
50 chr1:63251400-63257200 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015