Variant report

rSNPs within LD-proxies of this variant (count:26)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049818	chr12:44486312-45133783	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1038498	chr12:44679455-44816572	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv826356	chr12:44725069-44783443	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:44699000-44782000	Weak transcription	Aorta	Aorta
2	chr12:44754000-44775600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr12:44762000-44777400	Weak transcription	Fetal Intestine Small	intestine
4	chr12:44762000-44791200	Weak transcription	Fetal Intestine Large	intestine
5	chr12:44766600-44771400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr12:44767400-44773000	Weak transcription	HMEC	breast
7	chr12:44768200-44773400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr12:44769000-44772400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr12:44769800-44772000	Weak transcription	Brain Hippocampus Middle	brain
10	chr12:44769800-44773800	Weak transcription	Psoas Muscle	Psoas
11	chr12:44770000-44784400	Weak transcription	Pancreas	Pancrea
12	chr12:44770000-44785200	Weak transcription	Adipose Nuclei	Adipose
13	chr12:44770200-44774200	Weak transcription	HSMMtube	muscle
14	chr12:44770600-44772800	Weak transcription	Primary T helper cells PMA-I stimulated	--
15	chr12:44770800-44772000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr12:44770800-44773400	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr12:44770800-44775400	Enhancers	Fetal Brain Female	brain
18	chr12:44771200-44772200	Enhancers	Fetal Brain Male	brain
19	chr12:44771200-44775800	Weak transcription	Left Ventricle	heart
20	chr12:44771200-44781800	Weak transcription	Rectal Mucosa Donor 31	rectum

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