Variant report

Variant	rs74086779
Chromosome Location	chr14:104410371-104410372
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:23)
CpG islands
(count:0)
Chromatin interactive
region (count:4)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:23 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr14:104410037-104410687	K562	blood:	n/a	n/a
2	CREB1	chr14:104409903-104410532	K562	blood:	n/a	n/a
3	RCOR1	chr14:104410011-104410546	K562	blood:	n/a	n/a
4	JUN	chr14:104409877-104410542	K562	blood:	n/a	chr14:104410178-104410189
5	MAX	chr14:104410058-104410375	K562	blood:	n/a	n/a
6	TEAD4	chr14:104409974-104410473	K562	blood:	n/a	n/a
7	EP300	chr14:104409964-104410654	K562	blood:	n/a	n/a
8	CREB1	chr14:104409903-104410407	K562	blood:	n/a	n/a
9	NR2F2	chr14:104409962-104410383	K562	blood:	n/a	n/a
10	CEBPB	chr14:104410030-104410490	K562	blood:	n/a	n/a
11	TAL1	chr14:104410048-104410423	K562	blood:	n/a	n/a
12	EP300	chr14:104410036-104410393	K562	blood:	n/a	n/a
13	ATF1	chr14:104409999-104410408	K562	blood:	n/a	n/a
14	TBL1XR1	chr14:104410027-104410488	K562	blood:	n/a	n/a
15	JUND	chr14:104409993-104410470	K562	blood:	n/a	chr14:104410178-104410189
16	MYC	chr14:104410066-104410397	K562	blood:	n/a	n/a
17	BHLHE40	chr14:104410093-104410571	K562	blood:	n/a	n/a
18	POLR2A	chr14:104410113-104410371	K562	blood:	n/a	n/a
19	CEBPB	chr14:104409979-104410421	K562	blood:	n/a	n/a
20	MAFF	chr14:104410013-104410468	K562	blood:	n/a	n/a
21	ZNF384	chr14:104410108-104410443	K562	blood:	n/a	n/a
22	TBP	chr14:104410162-104410447	K562	blood:	n/a	n/a
23	GATA2	chr14:104409992-104410451	K562	blood:	n/a	chr14:104410306-104410316

No data

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:104403769..104405537-chr14:104408994..104411713,3	MCF-7	breast:
2	chr14:104408709..104411499-chr14:104426104..104427639,2	MCF-7	breast:
3	chr14:104403831..104408776-chr14:104408810..104412826,6	K562	blood:
4	chr14:104393603..104397064-chr14:104407702..104410726,3	K562	blood:

No data

Variant related genes	Relation type
RD3L	TF binding region
ENSG00000156411	Chromatin interaction
ENSG00000156414	Chromatin interaction
ENSG00000227729	Chromatin interaction

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs55797395	0.84[AFR][1000 genomes]
rs56253620	0.84[AFR][1000 genomes]
rs74086769	0.84[AFR][1000 genomes]
rs74086775	0.84[AFR][1000 genomes]
rs74086785	0.84[AFR][1000 genomes]
rs74086982	0.84[AFR][1000 genomes]
rs74089139	0.84[AFR][1000 genomes]
rs74089537	0.84[AFR][1000 genomes]
rs74089539	0.84[AFR][1000 genomes]
rs74089546	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045162	chr14:104140525-104594841	Flanking Active TSS Strong transcription Bivalent Enhancer Enhancers Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv542204	chr14:104140525-104594841	Active TSS Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	esv2758368	chr14:104147525-104412813	Active TSS Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
4	esv2760013	chr14:104147525-104412813	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
5	nsv902318	chr14:104255083-104464809	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
6	nsv902319	chr14:104255083-104620077	Weak transcription Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	64 gene(s)	inside rSNPs	diseases
7	nsv1048353	chr14:104361402-104483286	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
8	nsv902322	chr14:104365310-104464809	Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
9	nsv902323	chr14:104381687-104464809	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	nsv902324	chr14:104399640-104464809	Enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:104409000-104410600	Weak transcription	Left Ventricle	heart
2	chr14:104409000-104411600	Enhancers	Fetal Heart	heart
3	chr14:104409000-104414000	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr14:104410200-104410800	Flanking Active TSS	K562	blood

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