The 2.0 version of rSNPBase

Variant report

Variant rs74092325
Chromosome Location chr1:78359119-78359120
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78352400-78359800 Active TSS Right Ventricle heart
2 chr1:78353200-78359200 Active TSS Right Atrium heart
3 chr1:78355200-78360200 Weak transcription Lung lung
4 chr1:78355200-78361600 Weak transcription Pancreas Pancrea
5 chr1:78355600-78366600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:78355800-78359200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:78355800-78359400 Weak transcription Brain Germinal Matrix brain
8 chr1:78355800-78383800 Weak transcription Fetal Muscle Trunk muscle
9 chr1:78355800-78386200 Weak transcription Fetal Intestine Small intestine
10 chr1:78356000-78359800 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:78356000-78364200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:78356000-78365000 Weak transcription Fetal Intestine Large intestine
13 chr1:78356200-78366200 Weak transcription NHDF-Ad bronchial
14 chr1:78356200-78408600 Weak transcription HMEC breast
15 chr1:78356400-78365400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:78356400-78396000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:78356600-78365400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:78357200-78359600 Strong transcription HSMM muscle
19 chr1:78357200-78360200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:78357200-78360600 Strong transcription Fetal Muscle Leg muscle
21 chr1:78357200-78361600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:78357200-78366000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:78357400-78360000 Strong transcription NH-A brain
24 chr1:78357400-78365600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:78357400-78384400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:78357600-78359200 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
27 chr1:78357800-78362400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:78357800-78365600 Weak transcription Rectal Smooth Muscle rectum
29 chr1:78357800-78371000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:78358000-78360800 Strong transcription Muscle Satellite Cultured Cells --
31 chr1:78358200-78359400 Strong transcription HSMMtube muscle
32 chr1:78358200-78360400 Strong transcription Osteobl bone
33 chr1:78358200-78361600 Weak transcription Psoas Muscle Psoas
34 chr1:78358400-78359200 Genic enhancers Stomach Smooth Muscle stomach
35 chr1:78358400-78362200 Genic enhancers Skeletal Muscle Male skeletal muscle
36 chr1:78358400-78365800 Weak transcription Colon Smooth Muscle Colon
37 chr1:78358600-78359600 Strong transcription NHLF lung
38 chr1:78358600-78360600 Strong transcription Aorta Aorta
39 chr1:78358600-78365600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:78358800-78359200 Strong transcription Fetal Stomach stomach
41 chr1:78358800-78361400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:78359000-78359200 Flanking Active TSS Left Ventricle heart
43 chr1:78359000-78359400 Genic enhancers Fetal Heart heart
44 chr1:78359000-78359800 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015