Variant report

Variant	rs74111272
Chromosome Location	chr10:4530985-4530986
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11817902	0.91[AFR][1000 genomes]
rs74111299	0.91[AFR][1000 genomes]
rs74111300	0.83[AFR][1000 genomes]
rs74111301	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894787	chr10:4385379-4857717	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv1041785	chr10:4507158-4564194	Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4529800-4532800	Enhancers	NHDF-Ad	bronchial
2	chr10:4530800-4531000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr10:4530800-4531200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr10:4530800-4531200	Enhancers	Fetal Muscle Trunk	muscle
5	chr10:4530800-4531200	Enhancers	Left Ventricle	heart
6	chr10:4530800-4531400	Enhancers	Fetal Muscle Leg	muscle
7	chr10:4530800-4531800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr10:4530800-4531800	Enhancers	Adipose Nuclei	Adipose
9	chr10:4530800-4532000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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