Variant report

Variant	rs74122927
Chromosome Location	chr10:25303571-25303572
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs56003744	1.00[AMR][1000 genomes]
rs74122924	1.00[AMR][1000 genomes]
rs74122925	1.00[AMR][1000 genomes]
rs74122926	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3418576	chr10:25295995-25311122	Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25300200-25304800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:25301600-25304200	Weak transcription	A549	lung
3	chr10:25302400-25304800	Weak transcription	Esophagus	oesophagus
4	chr10:25303000-25303600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr10:25303000-25306400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr10:25303200-25304400	Active TSS	Fetal Brain Female	brain
7	chr10:25303200-25306600	Active TSS	Brain Anterior Caudate	brain
8	chr10:25303400-25305600	Active TSS	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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