Variant report

Variant	rs74124127
Chromosome Location	chr13:110707439-110707440
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs2893361	1.00[EUR][1000 genomes]
rs4771659	1.00[EUR][1000 genomes]
rs4773126	1.00[EUR][1000 genomes]
rs59891247	1.00[EUR][1000 genomes]
rs73622456	1.00[EUR][1000 genomes]
rs73622462	1.00[EUR][1000 genomes]
rs73622484	1.00[EUR][1000 genomes]
rs73622487	1.00[EUR][1000 genomes]
rs73622488	1.00[EUR][1000 genomes]
rs74124150	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049593	chr13:110615494-110725945	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110706400-110708000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr13:110706600-110708200	ZNF genes & repeats	Aorta	Aorta
3	chr13:110706800-110708400	Enhancers	Dnd41	blood
4	chr13:110707000-110708000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr13:110707200-110707800	Enhancers	Fetal Thymus	thymus
6	chr13:110707200-110707800	Enhancers	HSMMtube	muscle
7	chr13:110707400-110707600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr13:110707400-110707800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr13:110707400-110707800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr13:110707400-110708000	Genic enhancers	Cortex derived primary cultured neurospheres	brain
11	chr13:110707400-110708200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr13:110707400-110708200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr13:110707400-110708400	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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