The 2.0 version of rSNPBase

Variant report

Variant rs74124384
Chromosome Location chr1:172668445-172668446
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172655800-172673800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:172665200-172674200 Enhancers Primary T cells fromperipheralblood blood
3 chr1:172665200-172674200 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr1:172665200-172675000 Enhancers Primary T helper naive cells fromperipheralblood blood
5 chr1:172665600-172672200 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr1:172665800-172670600 Enhancers Dnd41 blood
7 chr1:172666000-172668600 Enhancers Primary T regulatory cells fromperipheralblood blood
8 chr1:172666000-172668600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:172666000-172669200 Enhancers Primary B cells from cord blood blood
10 chr1:172666000-172669600 Enhancers Primary monocytes fromperipheralblood blood
11 chr1:172666000-172670000 Enhancers Primary hematopoietic stem cells blood
12 chr1:172666200-172669600 Enhancers Primary mononuclear cells fromperipheralblood Blood
13 chr1:172666200-172670000 Enhancers GM12878-XiMat blood
14 chr1:172666200-172675600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:172666400-172669600 Enhancers Primary B cells from peripheral blood blood
16 chr1:172666400-172669800 Enhancers Fetal Thymus thymus
17 chr1:172666600-172669400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:172666600-172669400 Enhancers Monocytes-CD14+_RO01746 blood
19 chr1:172666800-172669600 Enhancers HUVEC blood vessel
20 chr1:172667000-172669200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:172667000-172669200 Enhancers Thymus Thymus
22 chr1:172667000-172669400 Enhancers Placenta Amnion Placenta Amnion
23 chr1:172667200-172668800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:172667200-172669000 Weak transcription Small Intestine intestine
25 chr1:172667200-172669400 Enhancers HMEC breast
26 chr1:172667400-172669000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:172667400-172669400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:172667400-172669400 Enhancers NHEK skin
29 chr1:172667400-172673800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr1:172667400-172674600 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr1:172667600-172668600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:172667600-172668800 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr1:172667800-172669200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
34 chr1:172667800-172669200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
35 chr1:172667800-172669200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:172667800-172669200 Enhancers Skeletal Muscle Female skeletal muscle
37 chr1:172667800-172669200 Enhancers NH-A brain
38 chr1:172667800-172669600 Enhancers Fetal Heart heart
39 chr1:172668000-172669000 Enhancers Skeletal Muscle Male skeletal muscle
40 chr1:172668000-172669400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
41 chr1:172668200-172668600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:172668200-172668600 Enhancers Fetal Muscle Leg muscle
43 chr1:172668200-172668600 Enhancers Left Ventricle heart
44 chr1:172668200-172669000 Enhancers K562 blood
45 chr1:172668400-172668600 Flanking Active TSS Primary T cells from cord blood blood
46 chr1:172668400-172668800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:172668400-172668800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
48 chr1:172668400-172668800 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr1:172668400-172668800 Enhancers Primary T helper cells fromperipheralblood blood
50 chr1:172668400-172668800 Enhancers Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015