Variant report

Variant	rs73038100
Chromosome Location	chr1:172713251-172713252
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
SLC25A38P1	TF binding region
ENSG00000234741	Chromatin interaction
ENSG00000270084	Chromatin interaction
ENSG00000135845	Chromatin interaction

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172711400-172714000	Weak transcription	Primary T cells from cord blood	blood
2	chr1:172712000-172714000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr1:172712000-172714000	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr1:172712000-172716400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr1:172712000-172716400	Enhancers	HMEC	breast
6	chr1:172712000-172717000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr1:172712200-172716400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr1:172712400-172714000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr1:172712400-172714400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr1:172712600-172714000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
11	chr1:172712600-172714000	Weak transcription	HUVEC	blood vessel
12	chr1:172712800-172713800	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr1:172712800-172713800	Weak transcription	NHLF	lung
14	chr1:172712800-172714000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr1:172712800-172714000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr1:172712800-172715200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr1:172713200-172714000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr1:172713200-172715800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr1:172713200-172716000	Enhancers	NHEK	skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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