The 2.0 version of rSNPBase

Variant report

Variant rs74130939
Chromosome Location chr1:193207742-193207743
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193155800-193243400 Weak transcription Pancreas Pancrea
2 chr1:193156200-193216800 Weak transcription Aorta Aorta
3 chr1:193159000-193210000 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:193167800-193210400 Weak transcription Ovary ovary
5 chr1:193168000-193228400 Weak transcription Stomach Mucosa stomach
6 chr1:193170400-193216000 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr1:193176800-193209200 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr1:193180600-193231200 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:193180800-193228200 Weak transcription Small Intestine intestine
10 chr1:193181800-193210400 Weak transcription Stomach Smooth Muscle stomach
11 chr1:193181800-193232800 Weak transcription Colonic Mucosa Colon
12 chr1:193183400-193211000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:193183400-193216000 Weak transcription NHEK skin
14 chr1:193184200-193209000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:193184400-193227600 Weak transcription HMEC breast
16 chr1:193185400-193211000 Weak transcription Fetal Brain Female brain
17 chr1:193185400-193218200 Weak transcription HepG2 liver
18 chr1:193186200-193216600 Weak transcription HUVEC blood vessel
19 chr1:193186600-193210600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:193186600-193216200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:193186800-193210400 Weak transcription Lung lung
22 chr1:193187000-193210400 Weak transcription Gastric stomach
23 chr1:193187000-193210800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:193187000-193212200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:193187000-193213000 Weak transcription Spleen Spleen
26 chr1:193187000-193216400 Weak transcription Esophagus oesophagus
27 chr1:193187000-193216800 Weak transcription Right Ventricle heart
28 chr1:193187000-193245200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:193191400-193217000 Weak transcription Brain Anterior Caudate brain
30 chr1:193191400-193221000 Weak transcription Brain Substantia Nigra brain
31 chr1:193191600-193216200 Weak transcription H1 Cell Line embryonic stem cell
32 chr1:193191600-193216600 Weak transcription Rectal Smooth Muscle rectum
33 chr1:193191600-193216800 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:193192200-193216000 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr1:193192200-193216800 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr1:193195600-193216000 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr1:193198600-193217000 Weak transcription A549 lung
38 chr1:193198800-193216000 Weak transcription GM12878-XiMat blood
39 chr1:193198800-193216600 Weak transcription Psoas Muscle Psoas
40 chr1:193198800-193216600 Weak transcription NHLF lung
41 chr1:193201000-193229600 Weak transcription H9 Cell Line embryonic stem cell
42 chr1:193201400-193208200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:193201600-193208200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:193201600-193208400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:193201600-193208400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:193201600-193208600 Strong transcription Fetal Thymus thymus
47 chr1:193201800-193209200 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr1:193202000-193228800 Weak transcription Brain Angular Gyrus brain
49 chr1:193202200-193207800 Strong transcription Primary T cells fromperipheralblood blood
50 chr1:193202200-193208000 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015