Variant report

Variant rs1536100
Chromosome Location chr1:193175933-193175934
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193155600-193178400 Weak transcription HUVEC blood vessel
2 chr1:193155800-193183000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:193155800-193243400 Weak transcription Pancreas Pancrea
4 chr1:193156200-193216800 Weak transcription Aorta Aorta
5 chr1:193156600-193180200 Weak transcription NH-A brain
6 chr1:193159000-193210000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:193159600-193178000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:193159800-193185000 Weak transcription Fetal Brain Male brain
9 chr1:193160200-193180200 Weak transcription HSMMtube muscle
10 chr1:193162000-193176200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:193162000-193176400 Weak transcription Thymus Thymus
12 chr1:193162000-193186200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:193162000-193186200 Weak transcription Placenta Placenta
14 chr1:193162200-193176200 Weak transcription Duodenum Mucosa Duodenum
15 chr1:193162200-193176400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:193162200-193176400 Weak transcription Liver Liver
17 chr1:193162200-193180400 Weak transcription NHLF lung
18 chr1:193162200-193183000 Weak transcription Fetal Muscle Trunk muscle
19 chr1:193162200-193186200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:193162400-193186000 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:193163000-193180000 Weak transcription Hela-S3 cervix
22 chr1:193164800-193177200 Weak transcription HSMM muscle
23 chr1:193166800-193176200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:193166800-193181400 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr1:193167800-193210400 Weak transcription Ovary ovary
26 chr1:193168000-193176400 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr1:193168000-193228400 Weak transcription Stomach Mucosa stomach
28 chr1:193168800-193184800 Weak transcription Fetal Stomach stomach
29 chr1:193169000-193190800 Weak transcription Brain Anterior Caudate brain
30 chr1:193169200-193176000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr1:193169400-193186400 Weak transcription Left Ventricle heart
32 chr1:193170000-193186200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr1:193170200-193191200 Weak transcription Rectal Smooth Muscle rectum
34 chr1:193170400-193216000 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:193170800-193178400 Weak transcription HepG2 liver
36 chr1:193171200-193176400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr1:193172600-193176200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:193172600-193185600 Weak transcription Brain Hippocampus Middle brain
39 chr1:193172800-193176400 Strong transcription Primary monocytes fromperipheralblood blood
40 chr1:193172800-193180200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:193172800-193186200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:193173400-193176400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:193173400-193186400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:193173600-193181000 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr1:193173800-193176200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:193173800-193177800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:193174000-193176200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:193174000-193176400 ZNF genes & repeats Dnd41 blood
49 chr1:193174000-193176800 ZNF genes & repeats Primary T cells from cord blood blood
50 chr1:193174000-193177400 Strong transcription Primary T regulatory cells fromperipheralblood blood

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