Variant report

Variant	rs74132294
Chromosome Location	chr1:185346722-185346723
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16823977	1.00[AFR][1000 genomes]
rs57172687	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59295359	1.00[AFR][1000 genomes]
rs60373073	1.00[AFR][1000 genomes]
rs74132217	1.00[AFR][1000 genomes]
rs74132219	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74132220	1.00[AFR][1000 genomes]
rs74132221	1.00[AFR][1000 genomes]
rs74132289	1.00[AFR][1000 genomes]
rs74132291	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74132300	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv548398	chr1:185136458-186003094	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:185342000-185347400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr1:185343000-185347200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr1:185344000-185346800	Enhancers	HUVEC	blood vessel
4	chr1:185346000-185347600	Enhancers	Osteobl	bone
5	chr1:185346200-185346800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr1:185346200-185347600	Enhancers	Muscle Satellite Cultured Cells	--
7	chr1:185346400-185346800	Weak transcription	Primary B cells from cord blood	blood
8	chr1:185346400-185347000	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr1:185346600-185346800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr1:185346600-185347600	Enhancers	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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