Variant report
| Variant | rs74138189 |
|---|---|
| Chromosome Location | chr10:44125530-44125531 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000223910 | Chromatin interaction |
| ENSG00000169740 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:9)
| rs_ID | r2[population] |
|---|---|
| rs55792208 | 1.00[AMR][1000 genomes] |
| rs61116341 | 1.00[AMR][1000 genomes] |
| rs74138076 | 1.00[AMR][1000 genomes] |
| rs74138078 | 1.00[AMR][1000 genomes] |
| rs74138081 | 1.00[AMR][1000 genomes] |
| rs74138085 | 1.00[AMR][1000 genomes] |
| rs74138088 | 1.00[AMR][1000 genomes] |
| rs74138200 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs9663770 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv947898 | chr10:44124512-44127210 | Inactive region | TF binding regionChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
