The 2.0 version of rSNPBase

Variant report

Variant rs74139869
Chromosome Location chr1:214592952-214592953
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
2 chr1:214575200-214595800 Weak transcription Fetal Kidney kidney
3 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
4 chr1:214581400-214601200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:214584200-214603000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:214584400-214600000 Weak transcription Fetal Muscle Trunk muscle
7 chr1:214584800-214595800 Weak transcription A549 lung
8 chr1:214585400-214593800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:214588000-214594000 Enhancers HUVEC blood vessel
10 chr1:214588600-214593000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:214589000-214593600 Enhancers Rectal Smooth Muscle rectum
12 chr1:214589400-214593800 Enhancers Colon Smooth Muscle Colon
13 chr1:214590400-214595600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:214590600-214593000 Enhancers Aorta Aorta
15 chr1:214590800-214593400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:214590800-214593400 Enhancers Duodenum Smooth Muscle Duodenum
17 chr1:214590800-214594200 Enhancers Skeletal Muscle Male skeletal muscle
18 chr1:214590800-214594200 Enhancers Skeletal Muscle Female skeletal muscle
19 chr1:214590800-214595800 Enhancers HMEC breast
20 chr1:214591000-214593400 Enhancers HSMMtube muscle
21 chr1:214591000-214594000 Enhancers Fetal Heart heart
22 chr1:214591000-214594000 Enhancers NH-A brain
23 chr1:214591000-214594400 Enhancers Placenta Amnion Placenta Amnion
24 chr1:214591200-214593600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:214591400-214593000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:214591400-214594000 Enhancers Stomach Smooth Muscle stomach
27 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
28 chr1:214591600-214593000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:214591600-214593400 Enhancers HSMM muscle
30 chr1:214591600-214595000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:214591600-214596200 Enhancers NHEK skin
32 chr1:214591600-214596400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:214591600-214598400 Weak transcription Adipose Nuclei Adipose
34 chr1:214591600-214600400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:214591600-214601200 Weak transcription Gastric stomach
36 chr1:214591600-214601400 Weak transcription Lung lung
37 chr1:214591800-214593000 Weak transcription Ovary ovary
38 chr1:214591800-214595000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:214591800-214595000 Weak transcription Esophagus oesophagus
40 chr1:214591800-214595200 Weak transcription Right Ventricle heart
41 chr1:214591800-214595200 Enhancers Osteobl bone
42 chr1:214592000-214594200 Enhancers HUES64 Cell Line embryonic stem cell
43 chr1:214592000-214594200 Enhancers iPS-20b Cell Line embryonic stem cell
44 chr1:214592000-214594400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:214592000-214600200 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr1:214592000-214602200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:214592200-214593400 Flanking Active TSS K562 blood
48 chr1:214592200-214594600 Enhancers HUES48 Cell Line embryonic stem cell
49 chr1:214592200-214595200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:214592200-214595600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015