Variant report

Variant	rs74140047
Chromosome Location	chr10:44198206-44198207
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs74138076	0.81[AFR][1000 genomes]
rs74138078	0.81[AFR][1000 genomes]
rs74138081	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762859	chr10:44193509-44200087	Enhancers Weak transcription Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44195800-44203200	Weak transcription	Ovary	ovary
2	chr10:44196000-44198800	Weak transcription	Left Ventricle	heart
3	chr10:44196000-44203800	Weak transcription	Right Atrium	heart
4	chr10:44197000-44198400	Weak transcription	Right Ventricle	heart
5	chr10:44197200-44198600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr10:44197800-44198800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr10:44197800-44200000	Enhancers	Spleen	Spleen
8	chr10:44198000-44198400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr10:44198200-44198400	Enhancers	Fetal Heart	heart
10	chr10:44198200-44198600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
11	chr10:44198200-44198600	Enhancers	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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