Variant report
Variant | rs74140412 |
---|---|
Chromosome Location | chr1:212366395-212366396 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:212359998..212362512-chr1:212365289..212368132,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10157725 | 1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs10465692 | 1.00[AMR][1000 genomes] |
rs11803526 | 1.00[ASN][1000 genomes] |
rs12739715 | 1.00[ASN][1000 genomes] |
rs13375351 | 1.00[AMR][1000 genomes] |
rs1663629 | 1.00[AMR][1000 genomes] |
rs17018697 | 1.00[ASN][1000 genomes] |
rs1774254 | 1.00[AMR][1000 genomes] |
rs2921126 | 1.00[AMR][1000 genomes] |
rs3121292 | 1.00[AMR][1000 genomes] |
rs35030678 | 1.00[ASN][1000 genomes] |
rs351389 | 1.00[AMR][1000 genomes] |
rs351411 | 1.00[AMR][1000 genomes] |
rs351412 | 1.00[AMR][1000 genomes] |
rs351415 | 1.00[AMR][1000 genomes] |
rs56056407 | 1.00[AMR][1000 genomes] |
rs56087556 | 1.00[AMR][1000 genomes] |
rs56160775 | 1.00[AMR][1000 genomes] |
rs56909493 | 1.00[AMR][1000 genomes] |
rs57517430 | 1.00[AMR][1000 genomes] |
rs58193366 | 1.00[AMR][1000 genomes] |
rs58843897 | 1.00[AMR][1000 genomes] |
rs58972361 | 1.00[ASN][1000 genomes] |
rs59354031 | 1.00[AMR][1000 genomes] |
rs60404556 | 1.00[AMR][1000 genomes] |
rs61331273 | 1.00[ASN][1000 genomes] |
rs61460239 | 1.00[AMR][1000 genomes] |
rs61682449 | 1.00[AMR][1000 genomes] |
rs6656320 | 1.00[ASN][1000 genomes] |
rs6687793 | 1.00[ASN][1000 genomes] |
rs701909 | 1.00[AMR][1000 genomes] |
rs71646161 | 1.00[ASN][1000 genomes] |
rs74138106 | 1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs74138110 | 1.00[ASN][1000 genomes] |
rs74138118 | 1.00[AMR][1000 genomes] |
rs74138120 | 1.00[AMR][1000 genomes] |
rs74138121 | 1.00[AMR][1000 genomes] |
rs74138123 | 1.00[AMR][1000 genomes] |
rs74138132 | 1.00[AMR][1000 genomes] |
rs74138133 | 1.00[AMR][1000 genomes] |
rs74138134 | 1.00[AMR][1000 genomes] |
rs74138135 | 1.00[AMR][1000 genomes] |
rs74138136 | 1.00[AMR][1000 genomes] |
rs74138137 | 1.00[AMR][1000 genomes] |
rs74138138 | 1.00[AMR][1000 genomes] |
rs74138139 | 1.00[AMR][1000 genomes] |
rs7515005 | 1.00[ASN][1000 genomes] |
rs7533954 | 1.00[ASN][1000 genomes] |
rs7537172 | 1.00[ASN][1000 genomes] |
rs7538315 | 1.00[ASN][1000 genomes] |
rs7551910 | 1.00[ASN][1000 genomes] |
rs792432 | 1.00[AMR][1000 genomes] |
rs811040 | 1.00[AMR][1000 genomes] |
rs9804026 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv999738 | chr1:212218618-212513690 | Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 36 gene(s) | inside rSNPs | diseases |
2 | nsv1009376 | chr1:212292357-212680320 | Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 48 gene(s) | inside rSNPs | diseases |
3 | nsv549139 | chr1:212332294-212876902 | Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 114 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:212363600-212368600 | Weak transcription | Lung | lung |
2 | chr1:212365600-212366400 | Enhancers | HepG2 | liver |
3 | chr1:212366000-212369600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |