The 2.0 version of rSNPBase

Variant report

Variant rs9804026
Chromosome Location chr1:212298845-212298846
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212274200-212301600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:212274400-212308200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:212280000-212299600 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr1:212281200-212308400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr1:212283800-212300400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:212284400-212300400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:212285000-212303200 Weak transcription Fetal Stomach stomach
8 chr1:212285400-212299600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:212285600-212311200 Weak transcription Hela-S3 cervix
10 chr1:212287400-212320600 Weak transcription A549 lung
11 chr1:212292600-212314600 Weak transcription Thymus Thymus
12 chr1:212293000-212300400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:212293200-212299600 Weak transcription Spleen Spleen
14 chr1:212293200-212313200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:212295400-212303800 Weak transcription K562 blood
16 chr1:212297800-212299000 Enhancers Stomach Mucosa stomach
17 chr1:212297800-212299400 Enhancers Primary B cells from cord blood blood
18 chr1:212297800-212299800 Enhancers Duodenum Mucosa Duodenum
19 chr1:212298000-212302400 Enhancers Primary neutrophils fromperipheralblood blood
20 chr1:212298200-212299000 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr1:212298200-212299000 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr1:212298200-212299000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:212298200-212299200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:212298200-212299200 Enhancers Primary T cells from cord blood blood
25 chr1:212298200-212299200 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr1:212298200-212299200 Enhancers Primary T regulatory cells fromperipheralblood blood
27 chr1:212298200-212299200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:212298200-212299200 Enhancers Fetal Thymus thymus
29 chr1:212298200-212299200 Enhancers Rectal Mucosa Donor 29 rectum
30 chr1:212298200-212299200 Enhancers NHEK skin
31 chr1:212298200-212299400 Enhancers Primary monocytes fromperipheralblood blood
32 chr1:212298200-212300000 Enhancers Rectal Mucosa Donor 31 rectum
33 chr1:212298200-212307200 Strong transcription Dnd41 blood
34 chr1:212298400-212299000 Enhancers Primary B cells from peripheral blood blood
35 chr1:212298400-212299000 Enhancers Primary hematopoietic stem cells blood
36 chr1:212298400-212299000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr1:212298400-212299000 Enhancers Adipose Nuclei Adipose
38 chr1:212298400-212299000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
39 chr1:212298400-212299200 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr1:212298400-212299200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:212298400-212299600 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:212298400-212301000 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr1:212298600-212299000 Enhancers Primary T helper cells fromperipheralblood blood
44 chr1:212298600-212299000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr1:212298600-212299000 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr1:212298600-212299000 Enhancers Fetal Heart heart
47 chr1:212298600-212299600 Weak transcription H1 Cell Line embryonic stem cell
48 chr1:212298600-212303400 Weak transcription Fetal Intestine Small intestine
49 chr1:212298600-212305600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:212298600-212306200 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015