Variant report

Variant	rs74146267
Chromosome Location	chr1:224930815-224930816
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs74146268	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524125	chr1:224902054-225021860	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:224921600-224931400	Weak transcription	Psoas Muscle	Psoas
2	chr1:224921800-224934600	Weak transcription	HMEC	breast
3	chr1:224924000-224932600	Enhancers	Fetal Brain Male	brain
4	chr1:224924800-224931600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr1:224925400-224932400	Weak transcription	Fetal Thymus	thymus
6	chr1:224925600-224931800	Weak transcription	Brain Anterior Caudate	brain
7	chr1:224926000-224934400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr1:224926200-224931600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr1:224926200-224932000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr1:224926200-224935000	Weak transcription	Left Ventricle	heart
11	chr1:224926200-224935200	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr1:224926600-224931200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr1:224927000-224931000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr1:224927400-224931000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr1:224927600-224935400	Weak transcription	Right Atrium	heart
16	chr1:224927800-224931600	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr1:224928200-224931000	Weak transcription	Fetal Kidney	kidney
18	chr1:224928200-224933000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr1:224928400-224931200	Weak transcription	NHDF-Ad	bronchial
20	chr1:224928600-224931200	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr1:224928600-224931400	Weak transcription	Fetal Brain Female	brain
22	chr1:224928800-224931200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr1:224929400-224932400	Weak transcription	GM12878-XiMat	blood
24	chr1:224929600-224931200	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr1:224929600-224933200	Weak transcription	Dnd41	blood
26	chr1:224930000-224934200	Weak transcription	NH-A	brain

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