Variant report

Variant	rs7419773
Chromosome Location	chr2:67164803-67164804
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10174577	0.93[ASN][1000 genomes]
rs10175701	0.84[ASN][1000 genomes]
rs10180582	0.84[ASN][1000 genomes]
rs10210389	0.93[ASN][1000 genomes]
rs10496138	0.98[ASN][1000 genomes]
rs13409540	0.91[ASN][1000 genomes]
rs1362484	0.84[ASN][1000 genomes]
rs17587626	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs36122997	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3732047	0.91[EUR][1000 genomes]
rs58683753	0.91[ASN][1000 genomes]
rs6721312	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6726820	0.96[ASN][1000 genomes]
rs6731610	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs67764531	0.98[ASN][1000 genomes]
rs7591850	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs868373	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762259	chr2:67109728-67165987	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67163200-67165000	Weak transcription	Fetal Lung	lung
2	chr2:67164000-67166200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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