The 2.0 version of rSNPBase

Variant report

Variant rs7430684
Chromosome Location chr3:48975294-48975295
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48957400-49003800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:48959000-48976000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:48959000-48976200 Strong transcription HUES64 Cell Line embryonic stem cell
4 chr3:48959400-48976200 Strong transcription Fetal Thymus thymus
5 chr3:48959600-48975800 Strong transcription HUES6 Cell Line embryonic stem cell
6 chr3:48962000-49000400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:48965200-49004200 Weak transcription Colonic Mucosa Colon
8 chr3:48965400-48981200 Weak transcription Right Ventricle heart
9 chr3:48965400-49000000 Weak transcription Esophagus oesophagus
10 chr3:48965800-48995400 Weak transcription H9 Cell Line embryonic stem cell
11 chr3:48965800-49000000 Weak transcription Placenta Amnion Placenta Amnion
12 chr3:48965800-49004000 Weak transcription Fetal Brain Male brain
13 chr3:48966000-48986000 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr3:48966000-49008000 Weak transcription Fetal Kidney kidney
15 chr3:48966400-48975800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:48966600-48986200 Weak transcription NHLF lung
17 chr3:48966800-48986200 Weak transcription HMEC breast
18 chr3:48967200-48977200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr3:48967200-48980800 Weak transcription Aorta Aorta
20 chr3:48967400-48994800 Weak transcription Gastric stomach
21 chr3:48967600-48983400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr3:48968000-48997200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr3:48968200-48976200 Weak transcription Small Intestine intestine
24 chr3:48968200-48997200 Weak transcription NHDF-Ad bronchial
25 chr3:48970400-48977000 Strong transcription Primary T regulatory cells fromperipheralblood blood
26 chr3:48970400-48982200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr3:48970400-48982200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:48970400-48982400 Weak transcription Brain Cingulate Gyrus brain
29 chr3:48970400-48984000 Weak transcription Brain Angular Gyrus brain
30 chr3:48970400-49004400 Weak transcription Pancreas Pancrea
31 chr3:48970600-48975800 Strong transcription GM12878-XiMat blood
32 chr3:48970600-48991600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr3:48970800-48976200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr3:48970800-48976200 Strong transcription Primary T cells fromperipheralblood blood
35 chr3:48970800-48986600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr3:48970800-48991000 Weak transcription Lung lung
37 chr3:48970800-49002000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr3:48971000-48975400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr3:48971000-48982200 Weak transcription H1 Cell Line embryonic stem cell
40 chr3:48971000-48994800 Weak transcription Spleen Spleen
41 chr3:48971400-48980600 Weak transcription Fetal Stomach stomach
42 chr3:48971400-48986200 Weak transcription Brain Anterior Caudate brain
43 chr3:48971400-48991000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr3:48971400-48991000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr3:48971600-48993800 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr3:48971800-48980800 Weak transcription Stomach Smooth Muscle stomach
47 chr3:48972000-48975800 Strong transcription Primary B cells from cord blood blood
48 chr3:48972000-49000400 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr3:48972200-48982600 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr3:48972400-48980600 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015