Variant report

Variant	rs7432751
Chromosome Location	chr3:88252417-88252418
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1431154	0.89[YRI][hapmap]
rs2567037	0.84[YRI][hapmap]
rs4303891	0.94[YRI][hapmap]
rs6551270	0.82[YRI][hapmap]
rs7621357	0.85[YRI][hapmap]
rs7624215	0.85[AFR][1000 genomes]
rs7632965	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7633486	0.90[AFR][1000 genomes]
rs9284814	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916330	chr3:88083580-88884125	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:88247600-88253000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:88247600-88253000	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr3:88247600-88253000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr3:88247600-88253000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr3:88252200-88253000	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr3:88252200-88253400	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr3:88252400-88253200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr3:88252400-88253200	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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