Variant report

Variant	rs7449704
Chromosome Location	chr6:24329284-24329285
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10946695	1.00[EUR][1000 genomes]
rs10946696	1.00[EUR][1000 genomes]
rs1321818	1.00[EUR][1000 genomes]
rs6899605	1.00[EUR][1000 genomes]
rs9467138	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv511339	chr6:24323858-24330240	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3473864	chr6:24325173-24329471	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv601159	chr6:24325627-24329730	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24324200-24329400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr6:24324400-24332000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr6:24324600-24330000	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr6:24324600-24332000	Weak transcription	HMEC	breast
5	chr6:24324600-24332200	Weak transcription	HSMMtube	muscle
6	chr6:24325000-24329400	Enhancers	HepG2	liver
7	chr6:24327400-24339200	Weak transcription	Pancreas	Pancrea
8	chr6:24329000-24329600	Enhancers	NH-A	brain
9	chr6:24329000-24329800	Enhancers	Fetal Kidney	kidney
10	chr6:24329000-24331000	Flanking Active TSS	A549	lung
11	chr6:24329000-24331200	Enhancers	Pancreatic Islets	Pancreatic Islet
12	chr6:24329200-24329600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:24329200-24330800	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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