Variant report

Variant	rs7450918
Chromosome Location	chr6:80831275-80831276
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10080237	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10080500	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10943694	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10943696	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs11962614	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12203867	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12208016	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12209988	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2143887	0.80[ASN][1000 genomes]
rs2322630	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2322631	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2322636	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs2874829	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35355485	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35447745	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3805920	0.81[ASN][1000 genomes]
rs3805922	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs3805925	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs3805926	0.82[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs3828754	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs4437429	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6909546	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6910201	0.81[ASN][1000 genomes]
rs6916507	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6930534	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs7740627	0.80[ASN][1000 genomes]
rs7753695	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7775977	0.81[ASN][1000 genomes]
rs910266	0.80[ASN][1000 genomes]
rs9294171	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9343970	0.82[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs9343971	0.82[ASN][1000 genomes]
rs9343973	0.80[ASN][1000 genomes]
rs9350846	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9352801	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9352803	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9359408	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9359409	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9361584	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9361587	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9443734	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9448886	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9448887	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9448893	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9448897	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9448898	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9448899	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9448908	0.81[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:80816800-80836000	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr6:80817000-80838200	Weak transcription	Fetal Muscle Trunk	muscle
3	chr6:80817000-80852800	Weak transcription	Psoas Muscle	Psoas
4	chr6:80817600-80832200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:80817600-80836000	Weak transcription	HSMM	muscle
6	chr6:80817600-80838200	Weak transcription	Aorta	Aorta
7	chr6:80817600-80842000	Weak transcription	Primary T cells fromperipheralblood	blood
8	chr6:80817600-80842400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr6:80817800-80840600	Weak transcription	Ovary	ovary
10	chr6:80818000-80838200	Weak transcription	Fetal Lung	lung
11	chr6:80818000-80861400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr6:80818000-80866000	Weak transcription	Primary T helper cells PMA-I stimulated	--
13	chr6:80821400-80838000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr6:80822600-80840600	Weak transcription	Left Ventricle	heart
15	chr6:80824400-80843000	Weak transcription	Fetal Heart	heart
16	chr6:80827400-80842800	Weak transcription	Brain Anterior Caudate	brain
17	chr6:80829200-80838200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr6:80829400-80832200	Weak transcription	Fetal Intestine Small	intestine
19	chr6:80829400-80834400	Weak transcription	Primary T cells from cord blood	blood
20	chr6:80829400-80844600	Weak transcription	Fetal Thymus	thymus
21	chr6:80829400-80852000	Weak transcription	Fetal Stomach	stomach

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