Variant report

Variant rs7453639
Chromosome Location chr6:53721602-53721603
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53695000-53743200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:53703200-53726400 Weak transcription Fetal Stomach stomach
3 chr6:53703800-53727600 Weak transcription Stomach Smooth Muscle stomach
4 chr6:53706000-53722400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr6:53706200-53722000 Weak transcription H1 Cell Line embryonic stem cell
6 chr6:53709800-53762200 Weak transcription Primary B cells from cord blood blood
7 chr6:53713000-53722000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr6:53717800-53731800 Weak transcription Primary hematopoietic stem cells blood
9 chr6:53718400-53723400 Enhancers Stomach Mucosa stomach
10 chr6:53718800-53723400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr6:53719800-53722000 Enhancers Brain Inferior Temporal Lobe brain
12 chr6:53719800-53727600 Enhancers Brain Substantia Nigra brain
13 chr6:53719800-53727800 Enhancers Brain Hippocampus Middle brain
14 chr6:53719800-53747800 Weak transcription Primary T cells from cord blood blood
15 chr6:53720000-53721800 Enhancers Duodenum Smooth Muscle Duodenum
16 chr6:53720000-53722600 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr6:53720000-53723000 Enhancers Left Ventricle heart
18 chr6:53720000-53724000 Enhancers Brain Cingulate Gyrus brain
19 chr6:53720000-53724400 Enhancers Brain Anterior Caudate brain
20 chr6:53720000-53727600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr6:53720200-53721800 Enhancers Aorta Aorta
22 chr6:53720200-53721800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
23 chr6:53720200-53722200 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr6:53720200-53722400 Enhancers Brain Angular Gyrus brain
25 chr6:53720200-53722600 Weak transcription Colon Smooth Muscle Colon
26 chr6:53720200-53723000 Enhancers Right Atrium heart
27 chr6:53720200-53723000 Enhancers Right Ventricle heart
28 chr6:53720400-53722800 Enhancers HepG2 liver
29 chr6:53720400-53723000 Enhancers Gastric stomach
30 chr6:53720600-53722000 Weak transcription NHEK skin
31 chr6:53720600-53722400 Weak transcription Lung lung
32 chr6:53720600-53741400 Weak transcription Dnd41 blood
33 chr6:53720800-53721800 Weak transcription HMEC breast
34 chr6:53720800-53736600 Weak transcription Fetal Thymus thymus
35 chr6:53721000-53722000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:53721000-53722000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr6:53721000-53723400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr6:53721200-53726200 Weak transcription Fetal Intestine Small intestine
39 chr6:53721200-53726400 Weak transcription Fetal Intestine Large intestine
40 chr6:53721200-53726600 Weak transcription Rectal Smooth Muscle rectum
41 chr6:53721200-53726800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr6:53721400-53722000 Enhancers Sigmoid Colon Sigmoid Colon
43 chr6:53721400-53722400 Weak transcription HSMMtube muscle
44 chr6:53721400-53723000 Enhancers Breast Myoepithelial Primary Cells Breast
45 chr6:53721400-53724200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
46 chr6:53721600-53721800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
47 chr6:53721600-53721800 Enhancers Pancreas Pancrea
48 chr6:53721600-53722200 Enhancers HUVEC blood vessel
49 chr6:53721600-53722400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr6:53721600-53723200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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