Variant report

Variant	rs748003
Chromosome Location	chr10:98158192-98158193
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs17232052	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3413353	chr10:98039370-98561524	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	nsv831950	chr10:98080972-98245434	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1047657	chr10:98123234-98183487	Weak transcription Active TSS Genic enhancers Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:98155600-98161200	Enhancers	Fetal Heart	heart
2	chr10:98156000-98159800	Enhancers	Left Ventricle	heart
3	chr10:98156000-98159800	Enhancers	Right Ventricle	heart
4	chr10:98156200-98159200	Weak transcription	Brain Cingulate Gyrus	brain
5	chr10:98156200-98159400	Weak transcription	Brain Angular Gyrus	brain
6	chr10:98156200-98160600	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr10:98156800-98160800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr10:98157000-98160400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr10:98157000-98160800	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr10:98157000-98162200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr10:98157200-98161000	Weak transcription	Right Atrium	heart
12	chr10:98157200-98162200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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