Variant report
| Variant | rs7485543 |
|---|---|
| Chromosome Location | chr12:4450359-4450360 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:4431200-4461200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr12:4431200-4465800 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr12:4431600-4460400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 4 | chr12:4431600-4462200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 5 | chr12:4431600-4463400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 6 | chr12:4431600-4465000 | Weak transcription | Pancreas | Pancrea |
| 7 | chr12:4432200-4463400 | Weak transcription | Small Intestine | intestine |
| 8 | chr12:4432200-4463600 | Weak transcription | Colonic Mucosa | Colon |
| 9 | chr12:4433200-4450600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 10 | chr12:4433200-4463200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 11 | chr12:4433800-4460400 | Weak transcription | Gastric | stomach |
| 12 | chr12:4434000-4461600 | Weak transcription | NHLF | lung |
| 13 | chr12:4434000-4465000 | Weak transcription | Esophagus | oesophagus |
| 14 | chr12:4439200-4456000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 15 | chr12:4441000-4465600 | Weak transcription | Fetal Intestine Large | intestine |
| 16 | chr12:4441400-4456000 | Weak transcription | Brain Angular Gyrus | brain |
| 17 | chr12:4441400-4459400 | Weak transcription | HepG2 | liver |
| 18 | chr12:4441800-4450400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 19 | chr12:4441800-4463600 | Weak transcription | Brain Substantia Nigra | brain |
| 20 | chr12:4443200-4450600 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr12:4443400-4464800 | Weak transcription | Fetal Brain Male | brain |
| 22 | chr12:4443600-4463400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 23 | chr12:4444400-4457400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 24 | chr12:4445200-4461000 | Weak transcription | Brain Hippocampus Middle | brain |
| 25 | chr12:4445600-4450600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 26 | chr12:4445800-4450600 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
| 27 | chr12:4445800-4450600 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 28 | chr12:4445800-4460600 | Weak transcription | Hela-S3 | cervix |
| 29 | chr12:4446000-4450400 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 30 | chr12:4446200-4450800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 31 | chr12:4446400-4450400 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 32 | chr12:4446800-4461000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 33 | chr12:4447400-4464800 | Weak transcription | Right Ventricle | heart |
| 34 | chr12:4447600-4450400 | Weak transcription | Fetal Stomach | stomach |
| 35 | chr12:4447600-4458200 | Weak transcription | HUVEC | blood vessel |
| 36 | chr12:4447600-4459000 | Weak transcription | Dnd41 | blood |
| 37 | chr12:4447600-4460400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 38 | chr12:4447600-4460400 | Weak transcription | Fetal Muscle Leg | muscle |
| 39 | chr12:4447600-4461000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 40 | chr12:4447600-4461200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 41 | chr12:4447600-4461400 | Weak transcription | Fetal Thymus | thymus |
| 42 | chr12:4447600-4461400 | Weak transcription | HSMMtube | muscle |
| 43 | chr12:4447600-4462600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 44 | chr12:4447600-4464400 | Weak transcription | Spleen | Spleen |
| 45 | chr12:4447600-4464800 | Weak transcription | Brain Germinal Matrix | brain |
| 46 | chr12:4447800-4450600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 47 | chr12:4447800-4459400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 48 | chr12:4447800-4460400 | Weak transcription | Lung | lung |
| 49 | chr12:4447800-4464200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 50 | chr12:4448000-4457800 | Weak transcription | Primary B cells from peripheral blood | blood |
