Variant report

Variant rs750887
Chromosome Location chr2:234330126-234330127
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234322400-234371800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:234323200-234336600 Weak transcription Brain Substantia Nigra brain
3 chr2:234323800-234334600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr2:234324400-234335000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr2:234324400-234338400 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:234325600-234330600 Weak transcription HepG2 liver
7 chr2:234326400-234331200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr2:234326400-234331600 Enhancers Fetal Thymus thymus
9 chr2:234326600-234330600 Flanking Active TSS Primary B cells from cord blood blood
10 chr2:234326800-234330800 Enhancers Ovary ovary
11 chr2:234326800-234330800 Enhancers Small Intestine intestine
12 chr2:234326800-234331800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
13 chr2:234327000-234331000 Enhancers Placenta Placenta
14 chr2:234327200-234330800 Enhancers Fetal Lung lung
15 chr2:234327200-234331200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
16 chr2:234327400-234330600 Weak transcription Pancreas Pancrea
17 chr2:234327400-234331200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr2:234327400-234331400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
19 chr2:234327600-234330200 Active TSS Gastric stomach
20 chr2:234327600-234331200 Enhancers H1 Cell Line embryonic stem cell
21 chr2:234327600-234331800 Active TSS Psoas Muscle Psoas
22 chr2:234328000-234330200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:234328200-234330200 Enhancers Sigmoid Colon Sigmoid Colon
24 chr2:234328200-234331000 Enhancers HUES6 Cell Line embryonic stem cell
25 chr2:234328200-234331200 Enhancers Lung lung
26 chr2:234328200-234332200 Strong transcription Primary monocytes fromperipheralblood blood
27 chr2:234328200-234333200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr2:234328200-234334200 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr2:234328200-234335000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr2:234328400-234330200 Flanking Active TSS Fetal Heart heart
31 chr2:234328400-234331200 Enhancers HSMMtube muscle
32 chr2:234328400-234332600 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr2:234328600-234330400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr2:234328600-234330600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr2:234328600-234330600 Enhancers Duodenum Mucosa Duodenum
36 chr2:234328600-234330600 Enhancers Rectal Mucosa Donor 31 rectum
37 chr2:234328600-234331800 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr2:234328600-234332800 Weak transcription Muscle Satellite Cultured Cells --
39 chr2:234328800-234330200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr2:234328800-234330600 Weak transcription HSMM muscle
41 chr2:234328800-234337000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr2:234328800-234343000 Weak transcription Liver Liver
43 chr2:234329000-234330200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr2:234329000-234330200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:234329000-234330600 Enhancers Primary T killer memory cells from peripheral blood blood
46 chr2:234329000-234330800 Weak transcription HMEC breast
47 chr2:234329000-234331200 Enhancers Fetal Muscle Trunk muscle
48 chr2:234329000-234332000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr2:234329000-234334800 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr2:234329000-234339200 Enhancers Primary T killer naive cells fromperipheralblood blood

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