The 2.0 version of rSNPBase

Variant report

Variant rs7516778
Chromosome Location chr1:92348071-92348072
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92338400-92348600 Weak transcription Right Atrium heart
2 chr1:92338600-92348800 Weak transcription Stomach Mucosa stomach
3 chr1:92338600-92349600 Weak transcription Pancreas Pancrea
4 chr1:92338600-92350000 Weak transcription Esophagus oesophagus
5 chr1:92338600-92350000 Weak transcription Left Ventricle heart
6 chr1:92338800-92350000 Weak transcription K562 blood
7 chr1:92340000-92349200 Weak transcription Lung lung
8 chr1:92340600-92348400 Enhancers Adipose Nuclei Adipose
9 chr1:92341800-92348600 Weak transcription Brain Hippocampus Middle brain
10 chr1:92342000-92348800 Weak transcription Right Ventricle heart
11 chr1:92342200-92348600 Weak transcription NHLF lung
12 chr1:92342400-92348800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:92342800-92348400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:92343400-92348800 Weak transcription Liver Liver
15 chr1:92343800-92348400 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr1:92343800-92348800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:92344000-92348600 Weak transcription Osteobl bone
18 chr1:92344200-92348800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr1:92344200-92349000 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr1:92344400-92348800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:92344600-92348600 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:92344600-92349200 Weak transcription NHEK skin
23 chr1:92344600-92349400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:92344600-92349800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:92344800-92349000 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr1:92345000-92348600 Weak transcription A549 lung
27 chr1:92345200-92348400 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:92345200-92349000 Weak transcription Duodenum Mucosa Duodenum
29 chr1:92345200-92349200 Weak transcription Fetal Intestine Small intestine
30 chr1:92345600-92348400 Weak transcription Fetal Heart heart
31 chr1:92345600-92348400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:92345600-92349200 Weak transcription Fetal Intestine Large intestine
33 chr1:92345800-92348800 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr1:92346400-92348600 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr1:92346400-92352400 Active TSS Ovary ovary
36 chr1:92347000-92348800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:92347000-92348800 Weak transcription Hela-S3 cervix
38 chr1:92347000-92350000 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:92347000-92350000 Weak transcription GM12878-XiMat blood
40 chr1:92347200-92348200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:92347200-92348200 Enhancers Placenta Placenta
42 chr1:92347200-92348400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:92347200-92348400 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr1:92347200-92348400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:92347200-92348400 Weak transcription Fetal Kidney kidney
46 chr1:92347200-92348400 Weak transcription NHDF-Ad bronchial
47 chr1:92347200-92348600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:92347200-92348600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:92347200-92348800 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:92347200-92349000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015