Variant report

Variant	rs7520453
Chromosome Location	chr1:246670481-246670482
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:345)
CpG islands
(count:61)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:345 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:246670341-246670913	HCT-116	colon:	n/a	n/a
2	CTCF	chr1:246670460-246670610	RPTEC	kidney:	n/a	n/a
3	ZBTB7A	chr1:246670014-246670828	K562	blood:	n/a	n/a
4	USF1	chr1:246670479-246670856	SK-N-SH_RA	brain:	n/a	chr1:246670628-246670644
5	CTCF	chr1:246670460-246670610	AG04450	lung:	n/a	n/a
6	TAF1	chr1:246670469-246670831	PFSK-1	brain:	n/a	n/a
7	HMGN3	chr1:246670055-246670850	K562	blood:	n/a	n/a
8	FOXP2	chr1:246670093-246670773	PFSK-1	brain:	n/a	n/a
9	CHD2	chr1:246669992-246670849	Hela-S3	cervix:	n/a	chr1:246670627-246670637
10	TAF1	chr1:246670443-246670854	H1-hESC	embryonic stem cell:	n/a	n/a
11	CCNT2	chr1:246670054-246670811	K562	blood:	n/a	chr1:246670626-246670635
12	POLR2A	chr1:246670357-246671002	MCF10A-Er-Src	breast:	n/a	n/a
13	CTCF	chr1:246670382-246670719	K562	blood:	n/a	n/a
14	CTCF	chr1:246670440-246670590	HBMEC	blood vessel:	n/a	n/a
15	HCFC1	chr1:246669709-246671402	Hela-S3	cervix:	n/a	n/a
16	POLR2A	chr1:246670232-246670987	PFSK-1	brain:	n/a	n/a
17	POLR2A	chr1:246670366-246670648	GM12891	blood:	n/a	n/a
18	ZBTB7A	chr1:246669774-246670863	ECC-1	luminal epithelium:	n/a	n/a
19	CTCF	chr1:246670445-246670646	LNCaP	prostate:	n/a	n/a
20	POLR2A	chr1:246670235-246670968	ECC-1	luminal epithelium:	n/a	n/a
21	IRF1	chr1:246670470-246670937	K562	blood:	n/a	chr1:246670625-246670639
22	CTCF	chr1:246670426-246670618	Lung_OC	lung:	n/a	n/a
23	POLR2A	chr1:246670361-246670781	A549	lung:	n/a	n/a
24	POLR2A	chr1:246670358-246670744	H1-hESC	embryonic stem cell:	n/a	n/a
25	CTCF	chr1:246670460-246670610	SK-N-SH_RA	brain:	n/a	n/a
26	NRF1	chr1:246670418-246670895	H1-hESC	embryonic stem cell:	n/a	chr1:246670652-246670663 chr1:246670593-246670604 chr1:246670652-246670663 chr1:246670635-246670644 chr1:246670631-246670642 chr1:246670652-246670666 chr1:246670590-246670604 chr1:246670593-246670607
27	TEAD4	chr1:246669872-246670614	K562	blood:	n/a	n/a
28	NR2F2	chr1:246670163-246670988	K562	blood:	n/a	n/a
29	EP300	chr1:246670399-246670552	HepG2	liver:	n/a	n/a
30	CHD2	chr1:246670471-246670492	K562	blood:	n/a	n/a
31	JUND	chr1:246670401-246670833	K562	blood:	n/a	chr1:246670630-246670639
32	CTCF	chr1:246670402-246670646	GM19240	blood:	n/a	n/a
33	BRCA1	chr1:246670381-246670516	GM12878	blood:	n/a	n/a
34	POLR2A	chr1:246670310-246670943	GM12878	blood:	n/a	n/a
35	ELF1	chr1:246670194-246670658	K562	blood:	n/a	n/a
36	POLR2A	chr1:246670147-246670800	A549	lung:	n/a	n/a
37	SIN3AK20	chr1:246670329-246670588	A549	lung:	n/a	n/a
38	CTCF	chr1:246670430-246670625	K562	blood:	n/a	n/a
39	MAX	chr1:246670441-246670810	A549	lung:	n/a	chr1:246670742-246670751
40	POLR2A	chr1:246670346-246670933	K562	blood:	n/a	n/a
41	POLR2A	chr1:246670286-246670955	MCF-7	breast:	n/a	n/a
42	POLR2A	chr1:246670319-246670904	HL-60	blood:	n/a	n/a
43	CTCF	chr1:246670460-246670610	GM12874	blood:	n/a	n/a
44	HDAC2	chr1:246670250-246670735	HepG2	liver:	n/a	chr1:246670303-246670322
45	POLR2A	chr1:246670120-246671047	GM12878	blood:	n/a	n/a
46	RCOR1	chr1:246670315-246670904	Hela-S3	cervix:	n/a	n/a
47	POLR2A	chr1:246670308-246670918	HepG2	liver:	n/a	n/a
48	ZNF143	chr1:246670397-246670596	K562	blood:	n/a	n/a
49	MXI1	chr1:246670377-246670799	Hela-S3	cervix:	n/a	chr1:246670736-246670751
50	JUN	chr1:246670374-246670532	H1-hESC	embryonic stem cell:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:246670459-246670509	HCF	heart:	n/a
2	chr1:246670459-246670509	NHDF-neo	bronchial:	n/a
3	chr1:246670459-246670509	ovcar-3	ovarian:	n/a
4	chr1:246670459-246670509	ProgFib	skin:	n/a
5	chr1:246670459-246670509	Hela-S3	cervix:	n/a
6	chr1:246670459-246670509	SKMC	muscle:	n/a
7	chr1:246670459-246670509	HCM	heart:	n/a
8	chr1:246670459-246670509	MCF10A-Er-Src	breast:	n/a
9	chr1:246670459-246670509	GM12891	blood:	n/a
10	chr1:246670459-246670509	BJ	skin:	n/a
11	chr1:246670459-246670509	PANC-1	pancreas:	n/a
12	chr1:246670459-246670509	NH-A	brain:	n/a
13	chr1:246670459-246670509	SAEC	small airway:	n/a
14	chr1:246670459-246670509	AoSMC	blood vessel:	n/a
15	chr1:246670459-246670509	HIPEpiC	eye:	n/a
16	chr1:246670459-246670509	H1-hESC	embryonic stem cell:	embryo
17	chr1:246670459-246670509	Jurkat	blood:	n/a
18	chr1:246670459-246670509	GM19239	blood:	n/a
19	chr1:246670459-246670509	PrEC	prostate:	n/a
20	chr1:246670459-246670509	HRE	kidney:	n/a
21	chr1:246670459-246670509	AG09309	skin:	n/a
22	chr1:246670459-246670509	SK-N-SH	brain:	n/a
23	chr1:246670459-246670509	GM12878	blood:	n/a
24	chr1:246670459-246670509	PFSK-1	brain:	n/a
25	chr1:246670459-246670509	A549	lung:	n/a
26	chr1:246670459-246670509	AG04449	skin:	fetal
27	chr1:246670459-246670509	RPTEC	kidney:	n/a
28	chr1:246670459-246670509	HCT-116	colon:	n/a
29	chr1:246670459-246670509	AG09319	gingival:	n/a
30	chr1:246670459-246670509	GM06990	blood:	n/a
31	chr1:246670459-246670509	LNCaP	prostate:	n/a
32	chr1:246670459-246670509	HRCEpiC	kidney:	n/a
33	chr1:246670459-246670509	HCPEpiC	choroid plexus:	n/a
34	chr1:246670459-246670509	IMR90	lung:	fetal
35	chr1:246670459-246670509	MCF-7	breast:	n/a
36	chr1:246670459-246670509	NT2-D1	testis:	n/a
37	chr1:246670459-246670509	T-47D	breast:	n/a
38	chr1:246670459-246670509	NB4	blood:	n/a
39	chr1:246670459-246670509	Caco-2	colon:	n/a
40	chr1:246670459-246670509	HAEpiC	amniotic membrane:	n/a
41	chr1:246670459-246670509	GM12892	blood:	n/a
42	chr1:246670459-246670509	SK-N-MC	brain:	n/a
43	chr1:246670459-246670509	ECC-1	luminal epithelium:	n/a
44	chr1:246670459-246670509	AG10803	skin:	n/a
45	chr1:246670459-246670509	CMK	blood:	n/a
46	chr1:246670459-246670509	NHBE	bronchial:	n/a
47	chr1:246670459-246670509	U87	brain:	n/a
48	chr1:246670459-246670509	AG04450	lung:	fetal
49	chr1:246670459-246670509	BE2_C	brain:	n/a
50	chr1:246670459-246670509	HNPCEpiC	eye:	n/a

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:246668302..246670787-chr1:246727323..246729930,4	MCF-7	breast:
2	chr1:246670144..246671144-chr11:9335985..9336628,2	HCT-116	colon:

No data

Variant related genes	Relation type
SMYD3	TF binding region
SMYD3	CpG island
ENSG00000166471	Chromatin interaction
ENSG00000162852	Chromatin interaction
ENSG00000162851	Chromatin interaction

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10158851	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10218761	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10754519	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10802414	0.81[ASN][1000 genomes]
rs10802415	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10802423	0.89[ASN][1000 genomes]
rs10924752	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10924753	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10924754	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2152887	0.89[ASN][1000 genomes]
rs2340782	0.89[ASN][1000 genomes]
rs4040219	0.89[ASN][1000 genomes]
rs4081311	0.89[ASN][1000 genomes]
rs4654276	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4654279	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6660942	0.81[ASN][1000 genomes]
rs6666314	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6668455	0.89[CEU][hapmap]
rs6673969	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7531320	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1004119	chr1:245957145-246813150	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
2	nsv535389	chr1:245957145-246813150	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	nsv1014529	chr1:245957145-246817877	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
4	nsv1000654	chr1:245966390-246778182	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
5	nsv535392	chr1:245966390-246778182	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
6	nsv868852	chr1:245969229-246811220	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
7	nsv948348	chr1:246090818-246853200	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
8	nsv430402	chr1:246124959-246787448	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
9	nsv497890	chr1:246143172-246778453	Enhancers Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
10	nsv998930	chr1:246166737-246702012	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
11	nsv1005825	chr1:246174208-246688635	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
12	nsv535398	chr1:246194546-246686301	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
13	nsv1001462	chr1:246194546-246686358	Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
14	nsv535399	chr1:246194546-246686358	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
15	nsv949329	chr1:246220147-246710091	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
16	nsv468839	chr1:246303128-246708467	Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
17	nsv549528	chr1:246303128-246708467	Weak transcription Enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
18	nsv1005573	chr1:246378676-246740427	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
19	nsv535405	chr1:246378676-246740427	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
20	nsv549531	chr1:246406762-246681116	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
21	esv2757779	chr1:246407146-246740944	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
22	esv2759012	chr1:246407146-246740944	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
23	nsv428346	chr1:246407146-246740944	Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
24	nsv1013800	chr1:246472691-246840960	Strong transcription Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
25	nsv535409	chr1:246472691-246840960	Flanking Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
26	nsv997661	chr1:246482924-246702012	Strong transcription Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
27	esv2762191	chr1:246546436-246815064	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
28	nsv1006777	chr1:246585396-246702012	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
29	nsv535412	chr1:246585396-246702012	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
30	nsv1002805	chr1:246608164-246890518	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
31	nsv535413	chr1:246608164-246890518	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
32	nsv1010453	chr1:246645797-246815052	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
33	nsv998579	chr1:246666041-246817877	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
34	esv1822854	chr1:246668544-246685307	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
35	nsv522303	chr1:246668544-246692992	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
36	nsv525447	chr1:246668544-246698653	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:246669200-246671000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr1:246669200-246671200	Active TSS	Muscle Satellite Cultured Cells	--
3	chr1:246669400-246671200	Active TSS	H1 Cell Line	embryonic stem cell
4	chr1:246669400-246671200	Active TSS	Fetal Kidney	kidney
5	chr1:246669400-246671400	Active TSS	Rectal Smooth Muscle	rectum
6	chr1:246669600-246670800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr1:246669600-246670800	Active TSS	Brain Angular Gyrus	brain
8	chr1:246669600-246670800	Active TSS	HepG2	liver
9	chr1:246669600-246671000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr1:246669600-246671000	Active TSS	HSMMtube	muscle
11	chr1:246669600-246671000	Active TSS	NHDF-Ad	bronchial
12	chr1:246669800-246670800	Weak transcription	Fetal Heart	heart
13	chr1:246669800-246670800	Active TSS	NHEK	skin
14	chr1:246669800-246671000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
15	chr1:246669800-246671000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr1:246669800-246671000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr1:246669800-246671000	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
18	chr1:246669800-246671000	Active TSS	Primary T helper naive cells from peripheral blood	blood
19	chr1:246669800-246671000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr1:246669800-246671000	Active TSS	Aorta	Aorta
21	chr1:246669800-246671000	Active TSS	Brain Anterior Caudate	brain
22	chr1:246669800-246671000	Active TSS	Brain Substantia Nigra	brain
23	chr1:246669800-246671000	Active TSS	Duodenum Mucosa	Duodenum
24	chr1:246669800-246671000	Active TSS	Fetal Intestine Large	intestine
25	chr1:246669800-246671000	Active TSS	Pancreas	Pancrea
26	chr1:246669800-246671000	Active TSS	Psoas Muscle	Psoas
27	chr1:246669800-246671200	Active TSS	H9 Cell Line	embryonic stem cell
28	chr1:246669800-246671200	Active TSS	HUES48 Cell Line	embryonic stem cell
29	chr1:246669800-246671200	Active TSS	iPS-20b Cell Line	embryonic stem cell
30	chr1:246669800-246671200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr1:246669800-246671200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr1:246669800-246671200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr1:246669800-246671200	Active TSS	Brain Inferior Temporal Lobe	brain
34	chr1:246669800-246671200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
35	chr1:246669800-246671200	Active TSS	Esophagus	oesophagus
36	chr1:246669800-246671200	Active TSS	Fetal Intestine Small	intestine
37	chr1:246669800-246671200	Active TSS	Pancreatic Islets	Pancreatic Islet
38	chr1:246669800-246671200	Active TSS	A549	lung
39	chr1:246669800-246671400	Active TSS	Colonic Mucosa	Colon
40	chr1:246670000-246670600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr1:246670000-246670800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr1:246670000-246670800	Active TSS	Primary neutrophils fromperipheralblood	blood
43	chr1:246670000-246670800	Active TSS	Primary B cells from peripheral blood	blood
44	chr1:246670000-246670800	Active TSS	Primary T helper cells PMA-I stimulated	--
45	chr1:246670000-246670800	Active TSS	Primary T helper cells fromperipheralblood	blood
46	chr1:246670000-246670800	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
47	chr1:246670000-246670800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
48	chr1:246670000-246670800	Active TSS	Primary T killer memory cells from peripheral blood	blood
49	chr1:246670000-246670800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr1:246670000-246670800	Active TSS	Cortex derived primary cultured neurospheres	brain

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