Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11265522	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11265526	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11265533	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11265534	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11265535	0.81[EUR][1000 genomes]
rs11805631	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12126310	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1981048	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2184066	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28368883	0.84[EUR][1000 genomes]
rs34655593	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3829790	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3928803	0.82[EUR][1000 genomes]
rs4656968	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4656971	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4656972	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61802165	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6656769	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6680969	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6691389	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs955615	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530077	chr1:160836448-161284904	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	esv3430322	chr1:160851829-160920480	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv947200	chr1:160870136-160905390	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:160899800-160905400	Weak transcription	Right Atrium	heart

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