Variant report

Variant	rs7532733
Chromosome Location	chr1:211018129-211018130
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1630770	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2357922	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2884334	0.90[AMR][1000 genomes]
rs2884335	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4293011	0.90[AMR][1000 genomes]
rs4532912	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4951674	0.91[AMR][1000 genomes]
rs6540626	0.90[AMR][1000 genomes]
rs6540630	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6540631	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9645355	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9661232	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832503	chr1:210948760-211103163	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211016400-211024200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:211016600-211023400	Weak transcription	Brain Anterior Caudate	brain
3	chr1:211017200-211021200	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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