The 2.0 version of rSNPBase

Variant report

Variant rs7537099
Chromosome Location chr1:95333419-95333420
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95329000-95336000 Weak transcription Gastric stomach
2 chr1:95329000-95336200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:95329000-95338200 Weak transcription Esophagus oesophagus
4 chr1:95329000-95385000 Weak transcription Colonic Mucosa Colon
5 chr1:95330000-95344200 Strong transcription Fetal Intestine Large intestine
6 chr1:95330600-95343400 Strong transcription Rectal Mucosa Donor 29 rectum
7 chr1:95330600-95348000 Weak transcription HepG2 liver
8 chr1:95330800-95333800 Enhancers Cortex derived primary cultured neurospheres brain
9 chr1:95330800-95338200 Weak transcription Fetal Muscle Trunk muscle
10 chr1:95331000-95336400 Weak transcription HMEC breast
11 chr1:95331200-95334400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:95331200-95334600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:95331200-95338200 Weak transcription Lung lung
14 chr1:95331400-95338000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:95331400-95338600 Weak transcription NHEK skin
16 chr1:95331400-95338800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:95331400-95339800 Weak transcription Fetal Brain Male brain
18 chr1:95332000-95334400 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr1:95332000-95338200 Weak transcription Placenta Placenta
20 chr1:95332000-95338800 Weak transcription Right Ventricle heart
21 chr1:95332200-95334400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:95332200-95336800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:95332200-95336800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:95332200-95338000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:95332400-95334400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:95332400-95336800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:95332400-95336800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:95332400-95338200 Weak transcription Brain Anterior Caudate brain
29 chr1:95332600-95344600 Strong transcription Duodenum Mucosa Duodenum
30 chr1:95332800-95334200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:95332800-95334600 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr1:95333000-95334000 Weak transcription Colon Smooth Muscle Colon
33 chr1:95333000-95334400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:95333000-95334400 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:95333000-95334400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:95333000-95334800 Weak transcription Placenta Amnion Placenta Amnion
37 chr1:95333000-95336600 Weak transcription Fetal Muscle Leg muscle
38 chr1:95333000-95336600 Weak transcription HSMM muscle
39 chr1:95333000-95336600 Weak transcription NHLF lung
40 chr1:95333000-95336800 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:95333000-95337000 Weak transcription H9 Cell Line embryonic stem cell
42 chr1:95333000-95337200 Weak transcription Fetal Kidney kidney
43 chr1:95333000-95338000 Weak transcription Brain Hippocampus Middle brain
44 chr1:95333000-95338200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:95333000-95338400 Weak transcription Brain Cingulate Gyrus brain
46 chr1:95333000-95338600 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr1:95333000-95338600 Weak transcription Rectal Smooth Muscle rectum
48 chr1:95333200-95334200 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr1:95333200-95334200 Weak transcription Pancreas Pancrea
50 chr1:95333200-95334400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015